Candidatus Nitrospira inopinata: NITINOP_0476
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Entry
NITINOP_0476 CDS
T04169
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NITINOP_0476 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nio02000
]
NITINOP_0476 (msbA)
Enzymes [BR:
nio01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NITINOP_0476 (msbA)
Transporters [BR:
nio02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NITINOP_0476 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
Zeta_toxin
AAA_21
DEAD
AAA_30
AAA_23
T2SSE
ABC_ATPase
AAA_18
AAA_28
DO-GTPase2
AAA_29
SRP54
SbcC_Walker_B
TsaE
RsgA_GTPase
DUF87
AAA_14
Rad17
NB-ARC
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
CUQ65452
UniProt:
A0A0S4KLY5
LinkDB
All DBs
Position
1:439920..441650
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AA seq
576 aa
AA seq
DB search
MLIFRRFLPFIQPYVTRMLASGLLVMSVAAVNLALLRLTGALWDVITVRQDADRMTELIG
VLLGLVLLQGLCTMGHSYLTAWVSQRIMADFRRHVFAHLQTLDVKFFARRRTGELLSRLM
NDVGIIQSVATELPIDSAKQLVTFVGGLAFLFTMNWRLSLLILILLPLLVLVAKMFGRRL
KALSLSLQDQTAALNTLAEEVISGIRIVKSFVQTKREEERFSAQIDQTLRVTMRRAGIMA
LFIPTISLLTFSIAAAVIWYGGRQVVEGAITPGDLFAFILFAGILIGPFSSAARVFSQVK
EAQGAMQRVFEILDVEPAVQDQPGAIVLSTVTGHVRFEDVGFAYDPRAPVLSHVSFEAKP
GEVIAIVGPTGAGKTTVVNLLHRFYDPTEGRIMIDDYDLKQVTVESWYRQLALVPQETIL
FGGTILDNVRYGNPAADEPEIERACKAAHAHDFIMSLPDRYRTIVGEKGINLSGGQRQRL
AIARAILKNPRVLLLDEATSSLDSESERLVQEALNRLMHGRTTFIVAHRLSTVQHADRIL
VLDKGRLVEEGTHAQLMERKGLYHYLYTIRLNDPVG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttgatctttagacgcttcctaccgttcattcagccgtacgtgacgcggatgctggca
agcggcctcctcgtcatgagcgtggccgccgtcaatctggccttgcttcgattgacaggc
gcgctgtgggacgtcatcacggtccgccaagatgccgaccgaatgacggaactgatcggc
gtcttgctcgggctcgtgcttctccaaggcctctgcacgatggggcacagctatctgacc
gcatgggtgtctcagcgaatcatggccgacttccgccggcacgtctttgcgcatttgcag
acgctggacgtcaagttcttcgcccgccgacgaaccggcgagctgctgtctcgattaatg
aacgacgtcggaatcatccagtcggtcgcgacggaactgccgatcgacagcgcaaaacag
cttgtcacgttcgtcggcggactggcctttctgttcacgatgaattggcgtctctcgctc
ctgatcttgattcttctcccgttgttggtgttggtcgccaaaatgttcggacgcaggctc
aaggcgctctccctgtcacttcaggaccagaccgccgccctcaacaccttggccgaggaa
gtgatttccggcatccgcatcgtcaaatcgttcgtgcagacaaagcgcgaagaagagcga
ttttcagcgcagatcgatcaaaccctccgtgtcaccatgcgccgagccggcatcatggcc
ctgttcatcccgaccatcagcctgctcaccttttccatcgcggccgccgtcatctggtac
ggaggccggcaagtggtcgagggcgccatcacccccggcgatctgttcgccttcatcttg
tttgcgggcatcctgatcggtcccttcagctcggccgcccgtgtcttctcgcaggtgaaa
gaggcccagggcgccatgcagcgggtgttcgaaatactggacgtggaaccggccgttcaa
gaccaaccgggagcgatcgtcctctccacggtgaccggccacgtgcggttcgaagacgtc
ggcttcgcctatgatccacgcgcccccgttctctcgcacgtatcgttcgaggccaagccc
ggcgaggtcatcgcgatcgtcggaccgaccggcgccggaaagacgaccgtcgtcaatctg
ctccaccgattctacgacccgaccgaaggtcgaatcatgatcgacgattacgatctgaaa
caggtgaccgtcgagagttggtatcggcaactggcgctggttccgcaggaaaccattttg
ttcggcggcaccattctggacaacgttcgctacggaaatcccgccgccgatgagccggaa
atagagcgcgcctgcaaggcggcgcatgcccacgactttattatgagtttgcccgacagg
tatcgaaccatcgtcggagaaaagggcatcaacctctcaggagggcagcgtcaacgcctt
gcgatcgcgcgggcgattctaaagaacccgcgcgtcttgctgctggatgaagccacgtcc
tctctcgacagcgagtcggaacgtctggtccaagaagccctcaatcgcctgatgcacggg
aggacgacgttcatcgtcgcccatcggctttccaccgtccaacacgccgaccgcattctt
gtcctggacaaaggccgtctcgttgaagaaggcacccacgcccagctcatggagcgcaag
ggcctctatcactatctgtacacaatccgcctgaacgatccggtgggatag
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integrated database retrieval system
