Candidatus Nitrospira inopinata: NITINOP_1005
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Entry
NITINOP_1005 CDS
T04169
Symbol
gcvP
Name
(GenBank) glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00260
Glycine, serine and threonine metabolism
nio00630
Glyoxylate and dicarboxylate metabolism
nio00670
One carbon pool by folate
nio00785
Lipoic acid metabolism
nio01100
Metabolic pathways
nio01110
Biosynthesis of secondary metabolites
nio01200
Carbon metabolism
Module
nio_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NITINOP_1005 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NITINOP_1005 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NITINOP_1005 (gcvP)
00670 One carbon pool by folate
NITINOP_1005 (gcvP)
Enzymes [BR:
nio01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NITINOP_1005 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CUQ65980
UniProt:
A0A0S4KNF6
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Position
1:complement(967610..970495)
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AA seq
961 aa
AA seq
DB search
MAEPNLLEPTDSFVHRHLGLTDADIQEMLATLGFHSLDALADATVPEDIRIRRPLSLPLH
RGERAILARLREVASKNVVARSLIGMGYYDCVTPGVIQRNILENPAWYTQYTPYQAEISQ
GRLEALVIFQTMVADLTGLPVANASLLDEATAAAEAMAMCLAIARAKGEERSEFFVSRDC
HPQTIAVLQTRAEPLGITIRTGVTTAIEHGGRLCGLLLQYPATDGYVGDFSDIVAKAHEA
GALVVVATDLLALTLLKPPGEFGADIAVGSTQRFGVPMGFGGPHAAFLSTKEEHKRQIPG
RLVGVSKDATGKPAFRLALQTREQHIRRERATSNICTAQVLLAIMAAMYAVYHGPDGLRR
IAERVHGLTLLLAEGLRRLGFDVRPDLFFDTIRVPLTGAQADQIVNRACGRGINLRRYDD
DSLGLSLDEVSSTEEVVRLWEIFSVSERLPFAPADLIPAVEPAYPPSLARTSTYLSHEVF
HRYHSEHEMLRYLHRLQAKDLSLVHSMIPLGSCTMKLNATTEMLPITWPEFAGLHPFAPE
EQTRGYQELIHQLTGWLAEISGFAAFSVQPNAGSQGEYAGLMVIRAYHRSRGEGHRNICL
IPVSAHGTNPASAAMAGMTVVPVACDRQGNINIDDLEAKAAQHRDRLAAVMLTYPSTHGV
FEAGVRRICQIIHTHGGQVYMDGANMNAMVGLCRPGDIGADICHLNLHKTFCIPHGGGGP
GVGPIGAAAHLVPFLPGHPLVKVGGADAIGPIAAAPYGSAGILPISWTYIALMGREGLTN
ATKVAILNANYMAKRLEKHFSVLYAGDAGLVAHEFILDLREFKESAGIEAMDVAKRLMDY
GFHAPTVSFPVPGTLMIEPTESESKAELDRFCDALIRIRSEIQEIAEGRQPRMNNLLKNA
PHTATAVAATEWNRPYSREQAAFPAPWVVQAKFWPSVSRIDEAYGDRHLVCTCPPMESYQ
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccgaaccttcttgagccgaccgattcttttgttcatcgtcaccttgggctc
acggacgcggatatccaagaaatgctggcgacgctgggcttccactcgctcgacgcgctc
gccgacgcgacggttcccgaagacattcggattcgccgacccctttctcttccccttcat
cggggcgaacgggcgatactggctcggttgagagaggtcgcgtccaagaacgtcgtggcc
cgttccttgatcggcatgggctactacgactgtgtgactcccggagtgatccaacggaac
attttggaaaatcccgcctggtacacccagtacaccccctatcaagccgagatttcgcag
gggcgcctggaggccctggtgatttttcaaaccatggtcgcggacttgaccggcttgccg
gttgcgaatgcgtcgctcttggacgaagccacggcggcggcggaagcgatggcgatgtgt
ttggcgatcgcccgagccaaaggcgaagaacgatcggagttcttcgtgtcacgcgattgc
catccccaaacgatcgcggtcttgcaaaccagagccgagccgctcgggatcaccatccga
accggcgtcacgacggcgatcgagcacggcggtcgattgtgcggtctcttgttgcaatac
cccgcgacggacgggtatgtgggagatttcagcgacatcgtcgccaaagcccatgaggcc
ggagctctcgtcgtggtcgccacggatctgctggccttgacgctgctcaagccccccgga
gaattcggcgccgacatcgccgtgggttcgacgcaacgattcggcgtgcccatgggattc
ggaggaccgcacgccgcgtttttatcgacgaaggaagagcacaagcggcagattcccggc
cgcctcgtcggcgtctccaaggacgcgacggggaaaccggccttccggctcgctctccaa
acgagagagcaacacattcgacgagagagggccaccagcaacatctgcacggcgcaagtc
ctgctggccatcatggcggccatgtacgcggtgtaccacgggcccgacggcctgcggcgc
atcgccgagcgcgtgcacgggctcacgctgctgctggcggaggggctgcggcggctcggg
ttcgacgtgcggcccgatctgtttttcgatacgatccgcgttccccttacgggcgcgcag
gccgaccagatcgtcaatcgggcctgcggacgcgggatcaatctgcgtcggtacgacgac
gattccctcggcctgtcgctcgatgaagtcagttcaacagaggaagtcgtccgcctctgg
gaaattttctccgtgagcgagcggctgcccttcgcgccggcggatctgattcccgccgtc
gagccggcctatccgccgtccctcgccaggaccagcacctatctctcccacgaggtcttc
caccgttaccactccgaacatgagatgctccggtatctccatcgcctgcaggccaaggac
ctgtcgctcgtgcattccatgatcccgttgggttcctgcacgatgaagctgaatgccact
accgagatgctgcccatcacctggccggagttcgccggacttcatccgtttgcgccggaa
gaacagacgcggggttatcaggaactcattcaccagctcaccggttggcttgcggagatc
tccggtttcgcggccttttccgttcagccgaacgcgggctctcagggagaatacgcgggc
ttgatggtgattcgcgcctaccaccggtccaggggtgaagggcaccggaacatctgcctg
attccggtctcggcccacggcaccaaccccgccagcgccgcaatggccggtatgacggtc
gtgccggtcgcctgcgatcgccaaggcaatatcaacatcgacgacctggaagccaaagcc
gcccaacaccgggaccggttggcggcggtgatgctcacctatccctcgacccacggggtc
ttcgaggccggcgtgcgccgtatctgccagatcattcacacgcacggcggtcaggtctat
atggacggcgccaacatgaacgccatggtgggtctgtgtcggcccggcgacatcggcgcg
gacatctgccatctgaaccttcacaagacgttttgcattccgcacggcggcggcggcccc
ggcgtgggacccatcggcgcggcggcgcacctggtccctttcctgcccggtcatccgctc
gtcaaggtggggggggccgacgccatcggtccgattgccgccgcgccctacgggagcgcc
ggcatccttccgatctcctggacgtacatcgccttaatgggacgagaagggctgaccaac
gccaccaaggtggccatcctgaacgccaactacatggcgaagcggctggagaaacacttt
tcggtcctgtacgccggagacgccgggttggtcgcgcatgagttcattctggacctgcgc
gagttcaaagaaagcgccggtatcgaggcgatggatgtagccaaacggctcatggactat
ggatttcacgcccccacggtgtcttttcccgtgcccggcaccctcatgatcgagccgacg
gaaagcgagtcgaaggccgagctcgatcgattttgcgacgcgctgattcgcatccgctcc
gaaatccaagagatcgccgagggccgccagccgcgcatgaacaatctgttgaaaaacgcg
ccccacacggcgaccgccgtcgcggccacggagtggaatcgtccttacagtcgcgagcag
gcggcgtttcccgccccctgggtcgtccaggccaaattttggccgagtgtgagccggatc
gacgaagcctacggcgaccgccacctcgtctgcacctgcccgccgatggagagttatcaa
ctgtaa
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