Candidatus Nitrospira inopinata: NITINOP_1059
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Entry
NITINOP_1059 CDS
T04169
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nio
Candidatus Nitrospira inopinata
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nio03009
]
NITINOP_1059 (rimO)
Enzymes [BR:
nio01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NITINOP_1059 (rimO)
Ribosome biogenesis [BR:
nio03009
]
Prokaryotic type
ribosomal protein modification factors
NITINOP_1059 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
DrmE_N
Motif
Other DBs
NCBI-ProteinID:
CUQ66034
UniProt:
A0A0S4KWN6
LinkDB
All DBs
Position
1:complement(1019572..1020957)
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AA seq
461 aa
AA seq
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MPRRATRENPVGGQDRTATIGFVNLGCSKNQVDSEVMLGTLAREGFRLTGDPSEAEVVII
NTCGFIEEAKQESINAIIEHGALKQAGSCRVLIAAGCLAQRYQGELLKELPELDAVVGTG
EFGKIADICRDLLAPKQRHRRLWISQPPYLYDDLAPRLRLGARHSAYVKIAEGCNRNCTF
CAIPLMRGKQKSRPIESIVAEVKQLAAEGVKEINLISQDTINYGVDLGLRQGLVSLLREL
VKVKGLHWIRPFYLYPQQVTDELLDLYASEETIAHYIDMPLQHINNALLKAMHRLGNRAS
IEKLVERIRTRVPGVTFRTAFIVGFPGETDQAFEELKTFVEQAQFDRVAVFCYSDEEGTP
AFGLSNKVDRSIAIERRNDLLTVQEAIAAAKGREKIGTRLDVLVDGPSEEQAGSLESRHE
GLAPEIDGVVHIPEGTAKPGDLVTVTITDATTYDLVGELVA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccgcgccacgcgcgaaaatccggtcggtggacaagaccgcaccgccaccatc
gggttcgtcaacctcggctgttccaaaaaccaggtcgattccgaagtgatgctcggcacc
ctcgcccgggagggatttcgcctcaccggcgatccgagcgaagccgaagtcgttatcatc
aacacctgcgggttcatcgaagaagccaaacaagagtcgatcaacgcgatcatcgaacat
ggagcgttgaaacaggccggctcctgccgcgtgctgatcgccgccggctgcctggcccag
cggtaccagggggaactgctcaaggaactgccggaactggacgcggtggtcgggaccggc
gagttcggcaaaatcgccgacatctgccgagacctgctcgcgcccaagcaacggcaccgg
cggctgtggatcagccagccgccctatctctacgacgacctggcgccgcggctcaggctc
ggcgcgcgccacagcgcctatgtcaaaatcgccgaaggctgcaatcgcaactgcaccttc
tgcgccattccgctcatgcggggcaaacagaagagccgaccgatcgagtcgatcgttgcg
gaagtgaagcaactggccgcggaaggcgtcaaggagatcaacctcatttcgcaagacacg
atcaactacggcgttgatctgggtttgcgccaggggctcgtgagcctgctccgcgaactg
gtgaaggtcaagggccttcactggatcaggcccttctatctctatcctcagcaggtcacg
gacgagttgctcgatctgtacgcgagcgaggaaacgatcgcccactacatcgacatgccc
cttcaacacatcaacaatgccctgctcaaggccatgcaccggctgggcaaccgggcctcg
atcgagaagctggtcgagcgcatcagaacccgcgtgcccggtgtcacgttccgcaccgcc
ttcatcgtaggctttcctggcgagaccgatcaggccttcgaggaactcaagacctttgtc
gaacaggcccagttcgatcgggtggccgtgttttgctattccgatgaagaggggaccccc
gcgttcggcctctcgaacaaggtggaccgatccatcgcgatcgagcgccgcaacgacctc
ctgaccgtccaagaggcaattgccgcagcaaagggccgggagaaaatcgggacacggctc
gacgtgctggtcgatggcccttcggaagaacaagcgggaagcctcgaaagccgtcacgaa
ggcttggcgccggagatcgacggcgtcgtacacattcccgagggaacggccaagccggga
gacctggtcaccgtcaccatcaccgacgccaccacctacgacctggtcggggagctcgtc
gcctaa
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