Candidatus Nitrospira inopinata: NITINOP_1128
Help
Entry
NITINOP_1128 CDS
T04169
Symbol
phr
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nio
Candidatus Nitrospira inopinata
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nio03400
]
NITINOP_1128 (phr)
Enzymes [BR:
nio01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NITINOP_1128 (phr)
DNA repair and recombination proteins [BR:
nio03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NITINOP_1128 (phr)
Prokaryotic type
NITINOP_1128 (phr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CUQ66103
UniProt:
A0A0S4KP13
LinkDB
All DBs
Position
1:complement(1083535..1084983)
Genome browser
AA seq
482 aa
AA seq
DB search
MRGIVWFRRDLRLADQPALSAACAECDEVIPFFVFDDPLLRSREFGAACVNFMLGSLSEL
AASLADRGLAFEWRRGEPVEEVARAARDWKADVVYWNRDYEPRAQVRDQQVRRQLERMGV
LVRTFKDHVVFEAHEIRSSTGEPLQRYSAYRARWWAHWRAAKPTALSVPTSLTASKRAAV
PPSGPLPSAEELGYASLSPWIAPGERRAWERLRRFCNGPLHRYGAGRNVPGIDGSSRLSP
HFRFGTISSRAAVQAALKTMAKGRGEVSRPDVLIWIDELIWREFFQQVLAEFPHVVSGPF
RHAAVPPTRQPGPERDRLFQAWCEGKTGYPIVDAGMRQLTQTGWMHNRVRMIVASFLIKD
LRIDWQSGERYFMAHLLDADVAANNGNWQWCASTGTDAMRGYRIFNPTLQSKKFDPEGLY
IRRYVPELASTPTAKIHEPHLMTLGEQEDARCRIGIDYPAPIVDHRLAREEYLALGRREK
VT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtatcgtttggtttcgaagggaccttcgcttggccgatcagccggccctgagc
gcggcctgcgcggaatgcgacgaagtgatccctttcttcgtgtttgatgatccgctgctt
cggtcgcgcgagttcggagcggcctgcgtgaacttcatgctcgggtcgctgagcgagttg
gccgcctcgctggctgatcgaggtctcgcgttcgagtggcggcgcggcgaaccggtggag
gaggtggcgcgggccgcgcgcgactggaaggccgacgtcgtctattggaatcgcgattac
gagccgcgggcgcaggttcgcgaccagcaggtccggcggcaactggagcggatgggcgtg
ctcgttcgaacgttcaaagatcacgtcgtgttcgaggcccacgaaatcaggagctcgacc
ggagaaccgctgcaacgatacagcgcctatcgggcacgttggtgggcccactggcgcgcc
gccaagccgacggcgctttccgttccgacttctctgaccgcctcgaagcgggcggcggtt
ccgccgtccggcccgctgccatccgcggaagagttgggctatgcgtctctctccccttgg
atcgcaccgggcgaacgcagggcctgggaacggctgcgtcggttctgcaacggccctctg
catcgctacggcgccggccgtaacgttcctggaatcgacggaagctcccgactttccccc
cactttcgtttcggtacgatctcctcccgcgccgccgttcaagcggcgctcaagacgatg
gccaaaggtcggggagaggtttcccgtcccgacgtactcatctggatcgatgagctgatc
tggcgggagttctttcagcaagtgctggccgagttcccccatgtggtctccggcccgttc
cgtcacgccgccgtcccgccgacacggcagccggggccggaacgagaccggttgtttcag
gcctggtgcgagggaaagaccggctatccgatcgtggatgccggcatgaggcaattgacg
caaaccggttggatgcacaaccgcgttcgcatgatcgtggcctcgtttttgatcaaagac
ctacgcattgactggcagagcggcgagcggtatttcatggcgcacctgctcgacgccgac
gtggccgcgaacaacggcaattggcaatggtgcgcctcgacgggaacggacgccatgagg
ggctatcgcattttcaacccgacgttgcagagcaagaaattcgatccggaagggctttac
atccggcgctatgtgccggaactggcctcgacgccgacggccaagattcacgaaccccac
ctgatgaccctcggcgaacaggaggacgcccgatgccggatcggaatcgattatcccgcg
ccgatcgtggatcatcgtctggcgcgcgaagagtatcttgctctcggcagacgggagaag
gtcacatga
DBGET
integrated database retrieval system
