Candidatus Nitrospira inopinata: NITINOP_1207
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Entry
NITINOP_1207 CDS
T04169
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nio
Candidatus Nitrospira inopinata
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nio03016
]
NITINOP_1207 (truD)
Enzymes [BR:
nio01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NITINOP_1207 (truD)
Transfer RNA biogenesis [BR:
nio03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NITINOP_1207 (truD)
Prokaryotic type
NITINOP_1207 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CUQ66182
UniProt:
A0A0S4KUT6
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All DBs
Position
1:complement(1161310..1162389)
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AA seq
359 aa
AA seq
DB search
MMSHAIGPYLTSEIPGIGGRIRVAPEDFRVEEQPLYLPCGIGEHLYIKVTKRLLSTPDLI
KLLSSTTGLKAKSIGMAGLKDARAVTTQMLSLHLATPEQVARLKTNERILSIEVLGRHRN
RLRPGHHAGNRFRLVIRDVAAHAKDTAPAILEILQRRGVPNYFGPQRQGRDGSNYRIGAT
LLTDQTKRASMSRAKRLWYLNAFQSHLFNRILAKRIDSLDHVFAGDWAVKTSNGSCFLVE
DEGTEQPRADRFEISPTGVLFGSRVSWAGGEPGRIEEAAAAELGMTKDLLIQAAKACGFR
GERRPLRVPLADPEWSLGGSTLTLAFTLPPGAYATNVLRELMKTEELGSSNDSLHRAEK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccacgcgatcggtccctacttgacgagcgagattcccggcatcggtgggcga
atccgcgtggcaccggaggattttcgcgtggaagaacagccgctgtacctcccctgcggc
atcggcgagcatctgtacatcaaggtcaccaagcggctcctgtccacgcccgatctgatc
aaactgctttcgagcacgacgggcctgaaagccaaatccatcggcatggccggcctcaaa
gacgcgcgggccgtcacgacccagatgctgtctctccatctcgccacgcccgaacaggtg
gctcgtctcaagaccaacgagcggattctttcaatcgaggtcctcgggcgccatcgtaat
cggctgcgccccggccaccatgccggaaaccggtttcgcttggtgattcgggacgtcgcg
gcccatgccaaggacacagccccggccattcttgagattcttcagcgccgaggcgtgccg
aattatttcggaccccaacggcagggacgggacggaagcaattatcggatcggcgcgacg
ttgctgaccgatcaaaccaaacgggcctcgatgagtcgcgccaaacgcctgtggtacctc
aacgcctttcagtcccatctgtttaaccgcattcttgccaagcggatcgactcgcttgat
catgtctttgccggagattgggcggtcaagacctcgaacggctcctgtttcctggtcgaa
gacgaaggcacggaacaaccccgagccgaccggttcgagatcagcccgacgggagtgttg
ttcggatcccgcgtctcatgggccggcggcgagccgggacggatcgaggaagccgccgcc
gccgaactgggcatgacgaaggacctgctgattcaagcggccaaggcttgcggattccgt
ggcgagcgccggcccttgcgggtcccgctggcggacccggagtggtcgctcggcggatca
accctgaccctggcctttacccttcctcccggcgcttacgccaccaacgtgctgagagaa
ctgatgaaaaccgaggaactcggctcttccaacgattctctccaccgggcggagaagtga
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