Candidatus Nitrospira inopinata: NITINOP_1294
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Entry
NITINOP_1294 CDS
T04169
Symbol
ihfB
Name
(GenBank) integration host factor (IHF), DNA-binding protein, beta subunit
KO
K05788
integration host factor subunit beta
Organism
nio
Candidatus Nitrospira inopinata
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nio03032
]
NITINOP_1294 (ihfB)
03036 Chromosome and associated proteins [BR:
nio03036
]
NITINOP_1294 (ihfB)
03400 DNA repair and recombination proteins [BR:
nio03400
]
NITINOP_1294 (ihfB)
DNA replication proteins [BR:
nio03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NITINOP_1294 (ihfB)
Chromosome and associated proteins [BR:
nio03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NITINOP_1294 (ihfB)
DNA repair and recombination proteins [BR:
nio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NITINOP_1294 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CUQ66269
UniProt:
A0A0S4KSG5
LinkDB
All DBs
Position
1:1247850..1248128
Genome browser
AA seq
92 aa
AA seq
DB search
MTKAQIIEQVSEQVPTLTKRQAEVVVNTIFDCVRDSLKNGDKTEIRGFGSFRLRARRMKE
GRNPKTGATVAVPAKRVPFFKAGKELKELLNK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcacaaatcatcgaacaggtttcagaacaagtccccacattgacgaagcgg
caagccgaagtcgtcgtcaacacgattttcgattgcgtcagagactcgctcaagaacggc
gacaaaacggaaatccgggggttcggcagtttcagactccgggcgaggcgcatgaaggaa
ggtcgcaaccccaagaccggcgcgacggtggccgtgccggcgaagcgagtgccgtttttc
aaagccggaaaagagttgaaagaactcttgaacaagtaa
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