Candidatus Nitrospira inopinata: NITINOP_1362
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Entry
NITINOP_1362 CDS
T04169
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase 1
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00300
Lysine biosynthesis
nio00470
D-Amino acid metabolism
nio01100
Metabolic pathways
nio01110
Biosynthesis of secondary metabolites
nio01120
Microbial metabolism in diverse environments
nio01230
Biosynthesis of amino acids
Module
nio_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NITINOP_1362 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NITINOP_1362 (dapF)
Enzymes [BR:
nio01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NITINOP_1362 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CUQ66337
UniProt:
A0A0S4KPH0
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All DBs
Position
1:complement(1317017..1317886)
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AA seq
289 aa
AA seq
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MKNGFFRGHGLGNDYLVMDPQELTFKLTPKNVQRICDRHWGLGSDGILALTPSKKADFGL
RIFNPDGSEAEKSGNGLRIFARYLHATGKTKKRRFTVETKGGLVSIALHIDRHGDAHEAT
VEMGRAVFAPAALPCALDVPELIQRPINVAGRTLIFTGVSVGNPHCVVFKPSGKSWSRED
LLELGPALETHPLFPKRTNVQLAVPTGRKEIFILIWERGAGETQASGSSSCAAASAAVRL
GLVESPVTVKMPGGTLRIDVAPDFSLTMKGPVAEVARGSLSPSFVRTLR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgggttctttcgcggacatggcctgggcaacgattatctcgtcatggacccc
caggagttgacatttaagctcacacccaagaacgttcaacgtatctgcgaccggcattgg
gggctgggcagcgacggcattctcgcgttgactccctcaaagaaagccgacttcggcctg
cggattttcaacccggacggcagcgaggccgaaaaatcgggcaacggccttcgcattttc
gcccgctacctccacgcgaccggcaagacgaaaaagcggcggttcacggtcgaaaccaaa
ggaggactcgtgtcgatcgcgctccacatcgaccgtcatggcgacgcccatgaagccacg
gtcgaaatggggcgggccgtcttcgcgccggcggctcttccctgcgctctcgacgtcccg
gaattgattcaacggccgatcaacgtcgcgggtcgcaccttgatcttcaccggcgtgagc
gtggggaacccccattgcgtggtgttcaagccttccgggaagtcctggtcgcgcgaggat
ctgttggagttggggccggccttggaaacccatccgttgtttcccaaacgaacgaacgtg
cagttggccgtcccgaccggtcgcaaggaaatcttcattctgatctgggagcgaggggcc
ggagaaacccaggcctccggttcttcgtcctgtgccgcggccagcgcagccgtgcggctg
ggactggtcgaaagccccgtcacggtgaagatgccgggcggaaccctgcgcatcgacgtc
gcccccgacttcagcctcaccatgaagggaccggtggccgaagtcgcgcggggctccctc
agcccctcatttgtccgaacgttgcgataa
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