Candidatus Nitrospira inopinata: NITINOP_1451
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Entry
NITINOP_1451 CDS
T04169
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00020
Citrate cycle (TCA cycle)
nio00190
Oxidative phosphorylation
nio00650
Butanoate metabolism
nio00720
Other carbon fixation pathways
nio01100
Metabolic pathways
nio01110
Biosynthesis of secondary metabolites
nio01120
Microbial metabolism in diverse environments
nio01200
Carbon metabolism
Module
nio_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NITINOP_1451 (sdhA)
00650 Butanoate metabolism
NITINOP_1451 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NITINOP_1451 (sdhA)
00720 Other carbon fixation pathways
NITINOP_1451 (sdhA)
Enzymes [BR:
nio01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NITINOP_1451 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
GIDA
NAD_binding_8
AlaDh_PNT_C
Pyr_redox
ATP-synt_DE
Motif
Other DBs
NCBI-ProteinID:
CUQ66426
UniProt:
A0A0S4KTC4
LinkDB
All DBs
Position
1:1400152..1402068
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AA seq
638 aa
AA seq
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MITLDPKVPPGPLEMKWDRRRFSGQLVSPANKRRIKIIVVGTGLAGASAASTLGQLGYQV
ECFCFHDSPRRAHSIAAQGGINAAKNYQDDGDSVARLFYDTIKGGDFRSREANVYRLAQI
STQIIDQCVALGVPFAREYGGQLANRSFGGVQVSRTFYCRGQTGQQLLLGAYSALCWQIE
RGQVTMRSHTEMLDVIVADGHARGIIVRDLVTGRLSAHTAHAVVLATGGYSNVYYLSTNA
SGCNVTATYRAWKQGAAFANPSFTQIHPTAIPPVGDHQAKLTLMSESLRNDGRIWVPVSP
SDRRPPHAIPPSERDYFLERRYPRFGNLVPRDVASRAVKAICDEGCGVGPGGQGVYLDFS
DVIRQQGIDVVRERYGNLFEMYQRITGEDAYQVPMRIYPAPHYTMGGLWVDYNLMSTIPG
LFVIGEANFADHGANRLGASSLMQGLADGYFILPYTIGHYLATVNSPPITEDHGAARAAL
ERVEARLRKLLQGKGRRRTASSFHRALGKILWDHCGMSRCAAGLRGALEAIPSLREEFWR
DVVVPGSGEAFNQALEYAGRVADFLEFAELMCHDALHREESCGAHFREEYQTEEGEPRRD
DDRFAHVAAWEYQEGEVPVLHKEPLNFEFVQPTTRSYQ
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgttggaccccaaagtgcctcccggtcctctggagatgaaatgggatcgccgc
cgtttcagcggacagttggtgagccctgccaacaagcggcggatcaagatcatcgtcgtc
ggcaccggccttgcgggagccagtgccgcgtcgaccttggggcagctcggctatcaggtc
gagtgtttttgcttccatgacagccctcgacgcgcgcacagtatcgccgcgcaaggcggc
atcaatgccgcgaagaattatcaagatgacggcgacagtgtcgcccggctgttttacgac
acgatcaaaggcggagattttcggtcacgtgaggcgaatgtctatcgattggctcaaatc
agcacgcaaatcatcgatcagtgcgtggcgctgggcgttccgtttgcgagagaatatgga
ggacaactggccaatcgttcgttcggcggggtgcaagtgtcgcgcaccttttattgccgg
ggccaaacaggacagcaactgctgctgggagcctactcggcgctctgttggcaaatcgaa
cgggggcaggtcacgatgcgttcgcataccgaaatgctcgacgtcattgtggccgatggc
catgctcgcggcatcatagtccgcgacctggtcacaggacgactctcggcccacaccgcc
catgctgtcgtgttggcgacaggcgggtacagcaacgtctattatctgtccaccaatgcc
agcggttgtaatgtgacggcgacctaccgggcttggaaacaaggggccgcgtttgcgaat
ccttccttcacccagatccatcccacggccattccgccggtcggcgaccatcaggcgaag
ctgacgttgatgtccgaatcgcttcggaacgacggacggatctgggtgcccgtttcgccg
tccgatcgtcggcctccacatgccattccaccgtccgagcgggattactttctggagcgc
cgctaccctcggttcggcaatctggtgccgcgggacgtcgcgtcgcgagccgtcaaggcc
atctgtgacgagggctgcggcgtcggtccaggcggccaaggggtctacttggatttcagc
gacgtgatccggcaacaggggatcgacgtcgtgcgggagcggtatggaaatttgtttgag
atgtaccaacggattaccggagaagacgcctatcaggttcccatgcgcatctatcctgcg
cctcattacacgatggggggcctgtgggtcgattataatctgatgagcaccatccccggc
ctcttcgtgatcggcgaagcgaacttcgccgaccacggggccaaccggttgggcgccagt
tcgctgatgcaagggttggccgacggatatttcatcttgccgtacacgatcggccattac
ctcgcgacggtcaacagcccgccgatcacggaagatcacggtgcagcgcgggcggcgctg
gagcgggtcgaagccaggctcaggaaactgttgcaagggaagggcaggcggcggaccgcc
tcctcgtttcatcgggcgctgggaaagatcctgtgggaccattgcggcatgtctcgctgc
gcggccgggcttcgaggggccctggaagcgattccatcgttgcgcgaggagttttggcgg
gacgtcgtcgtgccgggatcgggagaggcgttcaatcaagcactggagtatgccggacgg
gtggcggattttctggagttcgccgagctgatgtgtcacgacgcgctccatcgggaggag
tcgtgcggggcccatttccgggaggagtatcaaacggaagaaggcgaaccccgcagagac
gacgatcggtttgcccatgtcgcggcatgggagtatcaggaaggagaggttccggttctg
cacaaggagccgctcaacttcgaatttgtgcaaccgaccacgcgaagctatcagtga
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