Candidatus Nitrospira inopinata: NITINOP_1542
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Entry
NITINOP_1542 CDS
T04169
Name
(GenBank) putative Penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00550
Peptidoglycan biosynthesis
nio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NITINOP_1542
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nio01003
]
NITINOP_1542
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nio01011
]
NITINOP_1542
Enzymes [BR:
nio01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NITINOP_1542
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NITINOP_1542
Glycosyltransferases [BR:
nio01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NITINOP_1542
Peptidoglycan biosynthesis and degradation proteins [BR:
nio01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NITINOP_1542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Mersacidin
Motif
Other DBs
NCBI-ProteinID:
CUQ66517
UniProt:
A0A0S4KR90
LinkDB
All DBs
Position
1:1480163..1482469
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AA seq
768 aa
AA seq
DB search
MADHVPHSRVRPLRRGLPVLLGLVAIGVIALAGYGLILSATLALPRSDEHPPLLIYGAPF
MVSPGLDVTGSGLVDRLRQLGYRSVSVSPRAAGEYAATDDSIEIFLRAQPENRLPAKIVR
LRLAAGKIRELRSMPDGQPVPWVFLEPAVISGMRDGSKQVREWIQLDRIPSRLIDMVLAI
EDRRFFSHIGIDPFAIGRALWANLVHGAVVQGGSTLTQQLAKNLYYSPQRTISRKLKELV
AAVVLELKYSKQEILESYLNEIYLGQSGSVSIYGVGEAAHRYFGKTLDELSVEEMAMIVG
LIKGPNSYSPTRNAAQATERRNVVLRRLREQGIVSEEAWANAAGRPVKIVPAQDAVGDAP
YFVDYLLREAEEAVGDLPEGIKIFSTLDPWVQQTAHRALQEGLVRLEATYPSLKEAGSPL
QGAIVVLEPKTGRILAMVGGRDYRTSQFNRAAQARRSAGSLFKPFVYLAGFEAARTQGAA
GLTPATLLDDEPVTLESKAAPWSPKNYDQRYHGRVTVRTALEQSLNVPAVRVAHRTGLAP
LLNLLRAFGIAVPQPGDLSVALGSSPVSLLEIASAYGGLANGGVMVRPSAVSRVDDETGE
TVWNRAADRRQAASPQGTYLVTSLLKGVIDRGTGAKARNLGVEGAVAGKTGTTDGYRDAW
FVGYTTDLVIGVWVGFDDERPIKLTGAQAALPIWSKLAARLIPRDQPDFPMPEGVVERRI
DPQTGQLATAQCPEPITEVFIGGTEPADYCEVHGGGLWERLKRALGLF
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcatgttccacacagtcgagttcggccgctccggcgcggcctgccggtgttg
cttggcctcgtcgcgatcggcgtcatcgcgctggcgggctatgggcttatcctctcggcg
acgctggcgctccccaggagcgatgagcatccgcctctcctgatctacggcgcgccgttc
atggtctcgccgggtcttgatgtgaccggttccggactggtcgatcggctgcggcagttg
ggctatcggtcggtgtcggtctcgccgagggcggccggcgaatatgccgcgacggacgat
tccatcgagatttttctgcgcgcgcagccggaaaaccgtcttcccgccaagattgtgcgg
ctccggttggccgccgggaagattcgggagcttcgctcgatgcccgacggccaaccggtc
ccgtgggtattccttgagccggccgtgatcagcggcatgcgcgacgggtccaaacaggtc
agggagtggattcagctcgatcgaattccatcgcggttgatcgacatggtgctcgccatc
gaggaccggcggtttttctcgcacatcggcatcgatccttttgccattggccgggccctg
tgggcgaacctcgtacacggcgccgtcgtgcaagggggcagcacgttgacccagcaattg
gcgaaaaatctctactattcgccgcagcggacgatcagccgcaagctgaaggagctggtt
gccgcggtcgttctggagttgaagtacagcaaacaggagattctcgaaagttatctcaat
gaaatctatctggggcagtccggctccgtgtccatctatggcgtcggggaagcggcccat
cgctacttcgggaaaacgctcgacgagttgtcggtcgaagagatggcgatgatcgtgggg
ttgatcaagggccccaacagctattcgccgacgagaaacgcggcgcaggcgacggagcgg
cggaacgtggtgcttcgccgattgcgggagcaaggcattgtatcggaagaggcgtgggcg
aacgcggcgggtcggcctgtcaagatcgtgccggcccaggatgccgtgggcgacgcgccg
tattttgtcgattatctcctccgcgaagcggaggaagccgtcggcgatcttccggaggga
atcaagattttctcgacgctcgatccatgggttcagcaaacggcccaccgggctttgcaa
gagggactggttcggttggaagcaacgtatccgtcgctgaaagaagccggatcgcccctt
cagggcgccattgtcgtgctggagccgaagaccggccgcattctcgcgatggtcggcgga
cgcgattatcgaacgagtcaattcaaccgcgcggcgcaggcccgtcggtcggccggctcg
ctgttcaagccgtttgtgtatctggcggggtttgaagcggcccgaacgcagggcgcggcg
ggcctcaccccggcgacgttgcttgacgacgagcccgtcacgttggagtcgaaggccgct
ccgtggtcgccgaagaattatgaccagcggtaccacggccgggtgacggtgcggacggcg
cttgaacagtcgttgaacgttccggccgtgcgggtcgcccaccgcaccggtcttgcgccg
cttcttaacctgttgagggcgttcgggattgccgtgccgcagccgggcgatctctccgtg
gccttggggagttctcccgtctctctgctggagatcgcctcggcatacggcgggttggcc
aacggcggcgtgatggtgcgcccttcggccgtctctcgcgtcgacgatgaaacaggcgag
acggtctggaatcgagcggcggatcggcgccaggccgcgtctccgcaaggaacctatctt
gtgacgtcgctgctcaaaggtgtaatcgatcgcgggaccggcgccaaagcaaggaatttg
ggcgtggaaggggcggttgccggcaagacggggacgaccgatggataccgcgacgcctgg
ttcgtcggctatacgaccgacctcgtgatcggcgtgtgggtgggattcgacgatgaacgg
ccgatcaaactcacgggcgcgcaggcggcgctccccatttggagcaagttggcggcgcgg
ctgatcccacgcgatcagccggatttccccatgcccgagggagtggtcgagcgtcggatc
gatccccaaaccggtcaactggcgaccgctcaatgtccggagcccatcaccgaggtattc
atcggcggcaccgagccggccgactattgcgaggtccacggcggaggcctgtgggaacgg
ctcaagcgggcgttggggctgttctga
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integrated database retrieval system
