Candidatus Nitrospira inopinata: NITINOP_1572
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Entry
NITINOP_1572 CDS
T04169
Symbol
yrbF
Name
(GenBank) putative ABC transporter, ATPase component, ATP-dependent toluene efflux transporter
KO
K02065
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NITINOP_1572 (yrbF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nio02000
]
NITINOP_1572 (yrbF)
Transporters [BR:
nio02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
gamma-Hexachlorocyclohexane transporter
NITINOP_1572 (yrbF)
Phospholipid transporter
NITINOP_1572 (yrbF)
Mce system transporter
NITINOP_1572 (yrbF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CUQ66547
UniProt:
A0A0S4KQ34
LinkDB
All DBs
Position
1:1513966..1514757
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AA seq
263 aa
AA seq
DB search
MRRPQASNPWKMIKLVGVTKTLGGHPVLRGVDLVIPPRKLTTIIGRSGEGKSVLLKHMIG
LMQPDSGEVWVDGMEISRLRGRALNDVRKRFAMLFQGAALFDSLTVFENVAFPLRERLRM
KGPEVAGRVEEKLEQVGLAGMGHKFPAELSGGMRKRAGLARALVMQPEIILFDEPTTGLD
PLMAKSIHDLITGMQRKFGFTAVMVSHEIPEIFGISDYVAMLKGGRIALMAEPLEFQRTE
DPDIREFISVGGTVSLGAVAPGG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaggccgcaggcctcgaacccctggaagatgatcaaactggtcggcgtgacgaaa
accttgggcgggcatccggtgctgcggggggtggaccttgtcattccgccgcggaagctg
acgaccatcatcggccgcagcggagaaggcaagagcgtgctgctcaaacacatgatcgga
ctgatgcaacccgactcgggagaagtgtgggtcgatgggatggaaatctcgcgattgcgg
ggccgcgcgctcaatgacgtccgcaagcgatttgcgatgctgtttcagggcgcggcgttg
ttcgactcgctgacggtgttcgagaacgtggcgtttccgttgcgtgaacgacttcgcatg
aaaggaccggaggtcgccggccgcgtcgaagagaaactggagcaggtcggtctggccggg
atgggacataaattccccgccgagctgagcgggggcatgcgcaaacgggcgggtttggcg
cgggcgctggttatgcagccggagatcattctctttgatgagccgacgaccggccttgac
ccgctgatggccaagtcgatccatgatctcattaccggcatgcagcgcaaattcgggttc
accgccgtgatggtcagccatgaaattcccgaaattttcggcatttccgactatgtcgcc
atgttgaagggcggacgcattgcactgatggcggaacccctggaattccagcggacggaa
gatccggacattcgggaattcatctcggtcggagggaccgtctcgttgggcgcggtcgct
ccgggcggataa
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