Candidatus Nitrospira inopinata: NITINOP_1635
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Entry
NITINOP_1635 CDS
T04169
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio03030
DNA replication
nio03410
Base excision repair
nio03420
Nucleotide excision repair
nio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NITINOP_1635 (polA)
03410 Base excision repair
NITINOP_1635 (polA)
03420 Nucleotide excision repair
NITINOP_1635 (polA)
03440 Homologous recombination
NITINOP_1635 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nio03032
]
NITINOP_1635 (polA)
03400 DNA repair and recombination proteins [BR:
nio03400
]
NITINOP_1635 (polA)
Enzymes [BR:
nio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NITINOP_1635 (polA)
DNA replication proteins [BR:
nio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NITINOP_1635 (polA)
DNA repair and recombination proteins [BR:
nio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NITINOP_1635 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NITINOP_1635 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CUQ66610
UniProt:
A0A0S4KY80
LinkDB
All DBs
Position
1:complement(1573405..1576062)
Genome browser
AA seq
885 aa
AA seq
DB search
MTSPTDKRPTLYLIDGSAYIYRAFFALPPLNNSKGLQTNAVYGFTTMLLKILRERQPDDV
AVAFDEKGPTLRHEEFKEYKAQRPPMPDAMQAQIPYIHRVVEALAIPVLRQPGYEADDLI
GTLARKAEQAGYDVVIVTGDKDMFQLLSPHVRIYDPVKDKWFGEAECIERFGVEPARVVE
IMGLMGDATDNIPGVKGIGEKTAMKLIAQFGTIDELLRRIDEVTPARTKTLLIEQADQAR
LSRSLATIKTDCPIDFDQAALRVKPPHMDRLNELLRELEFTSLLKSVQASDESSGTKRTA
TALIESERAARAFVESLPVGAPLAVHCLLTGGSPWHADAQGIALSTGDHTAYIPLDVHEY
MRPITTLLHEPTRTKATHDLKAVLLAFHRIGITLAAPYFDTMVADYLLHPNRRDHQLDTL
ALELLNHRIGGSPRKQAEPTSLFEPAAGSSEQAAESASVIAKITPILLDQLKEQGSLTLF
EDVEMPLVPVLVEIERNGFLVDVEALHALSKELERELDGMMHTIAGLAGGEFNINSPKQL
AAVLFDKLGLKPIRKTKTGYSTDEDTLTQLATQHELPAQILNYRSLSKLKSTYVDALPEL
IHPETKRLHTSLNQTVAATGRLSSTDPNLQNIPVKGEYGLRIREAFIAPKGHHLLCADYS
QIEPRILAHLSQDPRLLAVFAKGEDIHMATAMEIFDRPAGQITREMRRAAKTVVFGIVYG
ISPFGLSQNIGVSQTEAKQYIDTFFEKFPAVRALMDRNIAEGREKGYTTTILGRRRPIPE
LQSNDPTQRGFGERMAVNSPIQGSAADLIKVAMINVHRALHRDLPHVKMILQVHDELIFE
VPDHDSDEAKRLVKHEMEAVGQQLGLSVPLKVDLGVGKNWRAAHP
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgccgaccgacaaacgtcccacgctgtatctgatcgacggcagcgcctacatt
taccgcgcgttcttcgcgctgccgcccttgaacaactcgaagggcctacaaaccaacgcg
gtctacgggttcacgacgatgctgctcaagatcctgcgggagcggcagcccgacgacgtc
gccgtggcgttcgatgaaaaggggccgacgctccggcacgaagaattcaaggagtacaag
gcccaacgccctcccatgcccgacgcgatgcaggcgcagattccgtacatccaccgcgtg
gtcgaggccctcgccatcccggtcctgcggcaaccgggctacgaggccgacgacttgatc
ggcacgctcgcgcggaaggccgaacaagccggctacgacgtcgtcatcgtcaccggcgac
aaagacatgttccagctcctttccccgcacgtccgcatctacgatcccgtcaaggacaaa
tggttcggcgaggcggagtgcatcgagcgattcggcgtcgagccggcgcgcgtcgtcgag
atcatggggctgatgggcgacgccacggacaacatccccggcgtgaagggcatcggcgaa
aaaaccgccatgaagctgatcgcgcagttcggcaccatcgacgaactgttgcgccgcatc
gacgaagtgacgccggcacggacgaaaaccctgctcatcgagcaggccgatcaggcgcgg
ctcagtcgaagcctcgccacgatcaaaaccgactgccccatcgacttcgaccaggccgca
ctccgggtgaaaccgccccatatggaccgactgaacgagctgcttcgcgaattggaattc
acctcgctgctcaagtcggtccaggcatcggacgagtcgtccggaacgaagcgcaccgcc
accgcgctgattgaaagcgaacgggcggcgcgggccttcgtggaatccttgcccgtcgga
gcaccgctggccgtccactgtctgctgaccggcggatcgccctggcacgccgacgcgcaa
ggaatcgcgctctccaccggcgaccacacggcgtacatccccctcgacgttcacgaatac
atgagacccatcacgacgcttcttcatgagccgaccagaaccaaggccacccacgacctg
aaggccgtcctgctcgcctttcaccgcatcggcatcacgctggccgctccttattttgac
acgatggtggccgactatctgttgcatcccaatcgccgcgaccaccaactcgacaccctg
gcgctggagctgctgaaccatcggattggcggatcccccaggaaacaggctgagccgacc
tcgctcttcgagccggcagccggatcgagcgaacaggccgcggagagcgcgtcggtcatc
gccaagatcacgccgatcctactcgatcaattgaaagaacaaggcagcctgacgctgttc
gaggacgtcgaaatgccgctggtgccggtgctcgtcgagatcgagcggaacggcttcttg
gtcgatgtcgaggcgctccatgcgctgagcaaggaactggaacgggaactcgacggcatg
atgcacacgatcgccggcctcgcgggcggcgagttcaacatcaattcgcccaaacagttg
gcggcggttctcttcgacaagctggggctcaaaccgatccgcaaaaccaagaccggctat
tccacggacgaagacacgctcacgcagcttgccacgcagcacgagttaccggcccaaatc
ctcaactaccgcagtttgagcaaactcaagtccacctatgtggacgccctgcccgaattg
atccatccggaaaccaaacggttgcatacctcgctcaaccaaaccgtcgcggccacgggg
cgactctcttccaccgatcccaacctgcaaaatattcccgtcaaaggcgagtacggtctc
cgcatccgcgaggctttcatcgcccccaaaggccatcacctgctctgcgccgactacagc
caaattgaaccgcgcatcctggcccacttgtctcaagatccccgcttactcgccgtcttc
gccaaaggggaagacatccacatggcgacggccatggagatcttcgaccggccggccggc
cagatcacccgcgagatgcgacgcgccgccaaaaccgtcgtcttcggcatcgtctacggc
atcagccccttcggcctgtcgcaaaacatcggcgtctcgcagaccgaggccaaacaatac
atcgacaccttctttgaaaagttccccgccgtgcgcgcgttgatggaccgcaacatcgcc
gaggggcgggaaaagggctacaccacgaccattctgggtcgccgccgaccgattcccgaa
ctgcaaagcaacgatccgacgcagcgcggcttcggcgagcggatggccgtcaacagtccc
atccaaggttcggcggcggacctgatcaaagtggccatgatcaacgtgcaccgagccctc
caccgggacctgccgcacgtgaagatgattctgcaagtccacgacgaactcattttcgaa
gtaccggatcacgattcggacgaagcgaagcggctggtgaaacacgagatggaagcggtg
gggcaacagctcggcctctcggttcccctgaaggttgatctcggcgtcggcaaaaactgg
cgggcggcgcatccgtaa
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