Candidatus Nitrospira inopinata: NITINOP_1711
Help
Entry
NITINOP_1711 CDS
T04169
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio03420
Nucleotide excision repair
nio03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NITINOP_1711
03430 Mismatch repair
NITINOP_1711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nio03400
]
NITINOP_1711
Enzymes [BR:
nio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NITINOP_1711
DNA repair and recombination proteins [BR:
nio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NITINOP_1711
MMR (mismatch excision repair)
Other MMR factors
NITINOP_1711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
ADDB_N
AAA_12
HHH
Laminin_I
Motif
Other DBs
NCBI-ProteinID:
CUQ66686
UniProt:
A0A0S4KU54
LinkDB
All DBs
Position
1:1652981..1655008
Genome browser
AA seq
675 aa
AA seq
DB search
MERQAKPYVLKRSADQAPPRRLMIDYAAALNPQQLAAVTAGGGPALVIAGAGSGKTRTLV
YRVAYLIDSGVDPSNILLLTFTRKSAQEMLERAGELIGAGTQRVCGGTFHSVANILLRRY
GRSIGVEPGFTILDRGDAEDLIGLCRTQLGFNEKAKRFPRKGTIMELFSKSENTLRSLED
VLLEEFSHFSDHLEDLAKLHRAYQAAKRQKQLLDYDDLLVMLRRVLETDEAARTAISRQY
RYILVDEYQDTNRLQADVIRRLAATHDNVMVVGDDSQSIYAFRGATFRNIMEFPDLFPGA
TVYKLEENYRSTQPILNLANSIIEEAAEKYSKRLFTRKLDGPLPVLAEAAGENAQSRFIA
QKILELREEGVPLNEVAVLFRSSFHSFDLEIELSRAGLPFIKRGGVKFIETAHVKDVLAH
VRVAANPLDLVSWHRALMLVEGVGPKKAQDLLSLIAKADRPFDVLRAGAGRSARALATLA
DTLDGLTGDDRRSPAESIAHVYDYYLPILKDQYDDYPKRMRDLDHLHTIAGNYAELDEFL
ADLALEPPDGSVVDVEATERDDERLVLSTIHSAKGLEWDAVFVIWVVDGRFPSAYSFLTD
EELEEERRLFYVAVTRARRHLFLTYPVNVYDKSSGMVLSKPSRFLDPVSPELLEVLALVE
EGGREEEWRTSRYWD
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaacgacaagccaagccctacgtgttgaaacggtcagccgaccaggcgccgccgcgc
cgcctgatgatcgattacgccgccgcgctcaatccgcagcaattggcggcggtgacggcg
ggcggggggccggcgctggtgatcgccggcgcggggagcggcaagacccgcacgttggtc
tatcgcgtggcctatctgatcgattccggcgtcgatccgtcgaacatcctcttgcttact
ttcacgcgcaagtcggcgcaggaaatgttggagcgtgcgggcgagttgatcggggccggc
acgcagcgcgtgtgcggcgggacgttccactccgtcgccaatatcctcttgcgtcggtac
ggccgttcgatcggcgtggagccggggttcacgattctggatcgcggcgacgcggaagat
ttgatcgggctgtgccgcacgcagttgggcttcaatgaaaaggctaaacgcttcccccgc
aaggggacgatcatggagctgttcagcaagagcgaaaatacgctgaggagcttggaagac
gtcctgctggaagagttcagccatttctccgaccatctggaggacttggccaaactgcac
cgggcctatcaggcggccaagcggcagaaacaattgttggactacgacgacctgctggtg
atgctgcggcgggtgctggagaccgatgaggcggcccggacggcgatttcgcgccagtac
cggtacattctggtggatgaatatcaagacacgaatcggttgcaggcggacgtgatccgc
cggttggccgcgacgcacgacaacgtgatggtcgttggggacgattcgcagtcgatctac
gcgttccggggggcgacgttcagaaacatcatggagtttccggatctctttccaggcgcc
acggtgtacaagctggaggaaaactatcgcagcacgcagccgatcttgaatctggcgaac
agcatcatcgaggaggcggcggagaaatacagcaagcgtttgtttacaaggaagctcgac
ggcccgttgccggtgctggcggaggcggccggcgagaatgcgcagtcgcggttcatcgcg
cagaagattctcgagctgcgggaggaaggggtgccgttgaacgaggtggcggtgctgttt
cgatcgagcttccattccttcgatttggaaatcgagctctcccgcgccgggctgccgttc
atcaagcgaggcggcgtcaagttcatcgagacggcccacgtcaaggacgtgctcgcgcac
gtgcgggtggccgccaatccgctcgatctggtcagttggcaccgggcgctcatgttggtg
gagggtgtcgggccgaagaaggctcaagacctgttgtcgttgattgcgaaggccgatcgg
cctttcgatgtgttgcgcgccggggccggccgctccgctcgcgcgctcgcgactctcgcc
gacacgttggatggtttgacgggagacgaccgtcggtcgccggcggaatccatcgcccac
gtgtacgactactacctgcccattctgaaggatcagtacgacgactatcccaagcgcatg
cgggatctggatcatctccatacgattgccgggaactatgccgagctcgatgagtttttg
gccgatctggccttggagccgccggatgggagcgtcgtggacgtggaagcgacggagcgc
gacgacgagcgactcgtattgtccacgatccattcggccaaggggctggaatgggacgcg
gtctttgtgatctgggtggtggacggtcggtttccgtcggcttattcgtttctgaccgac
gaggaactggaagaagaacggcggctgttctatgtggccgtgacgcgcgcgagacggcat
ttgttcctgacctatccggtcaacgtatacgacaagtccagcgggatggtgctctcgaaa
ccgtctcgtttcctcgatcctgtctcgcccgagcttcttgaggtgcttgccttggtcgaa
gagggggggcgagaggaggagtggaggacgtcgcggtattgggattga
DBGET
integrated database retrieval system
