Candidatus Nitrospira inopinata: NITINOP_1792
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Entry
NITINOP_1792 CDS
T04169
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
nio
Candidatus Nitrospira inopinata
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nio03021
]
NITINOP_1792 (rpoH)
Transcription machinery [BR:
nio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NITINOP_1792 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
CUQ66767
UniProt:
A0A0S4KSN3
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All DBs
Position
1:complement(1718175..1719290)
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AA seq
371 aa
AA seq
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MVTGPVRPRDVVAGWREGTLPLNIGHCHWPAFCYSYPLVMTAFSDAHESDSPEPDVLDPS
DEELHAERLPVELLPPPEPAGDSSATAPASVPATALQRYLAEIRRYPYLSKEEELRLFQE
YKTLGSREAAVKLIMANLRVSVAIAAEYLHTGADHMDLIQEGNVGLLHAIKKFDPTKNVR
FYAYAAWWSRAYILRYLLNNYRLIKIGTTQDQRKLFYNLKKEKAKLEREGFAPDTKLLAD
RLQVREQDVIEMDQRLGNWEVSLDQPIGDNQDASLLDVLPSQQQPTDDQLADHQLRKLFR
TKLAEFIKTLEERDEDILRNRILSDNPLTLDELGAKYGITKERTRQLEARIIKRLRDYIK
KDVKDFDSLRA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccggtccggttcggccccgcgatgtggtagccggctggcgcgagggcactcta
ccattgaacattggccattgtcactggccggcgttctgttatagttacccacttgttatg
accgcgttctccgacgctcatgagagtgattccccggaacccgacgtgctggacccctcg
gacgaggaactgcacgccgagcggctcccggtcgaactgctcccccccccggaaccagcc
ggcgactcttctgcgaccgcgccggcgagcgtaccggccacggcgttgcaacgatacctc
gcggaaatccgccgatacccctatctctccaaagaagaagaactccggttgtttcaagaa
tataaaacgctcggcagccgcgaagccgcggtcaagctcattatggccaacttgcgcgtt
tcagtcgcgatcgcggcggaatatctgcacaccggcgccgatcacatggacctcatccag
gaaggcaacgtcggcctgctgcatgcgatcaagaaattcgacccgaccaagaacgtccgc
ttttatgcctatgccgcctggtggtcgcgagcctatatcttacgatatctgctgaacaac
tatcggctgatcaagatcggcaccacccaagaccagcgcaagctgttctacaacctcaaa
aaagaaaaagcgaagctggaacgggaaggtttcgcccccgacacgaaactgctcgccgac
cgtttgcaggtccgcgagcaggacgtcattgagatggatcaacgcctgggcaattgggaa
gtgtcgctggatcagccgatcggcgacaaccaagacgccagtctgctcgacgtcttgccc
tctcaacaacaacccaccgatgatcagttggccgaccatcaactgcgcaagctgttccga
accaagctcgccgagttcatcaagacgctggaagagcgggacgaggacattctgagaaac
cgcatcctgtccgacaatcccctgacgctggacgaactgggagccaagtacggaatcacc
aaagagcgaacccgccaattggaagcccgcatcatcaaacgactgcgcgactacatcaag
aaagacgtcaaggatttcgacagcttgcgagcgtga
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