Candidatus Nitrospira inopinata: NITINOP_1922
Help
Entry
NITINOP_1922 CDS
T04169
Symbol
thiC
Name
(GenBank) thiamin (pyrimidine moiety) biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00730
Thiamine metabolism
nio01100
Metabolic pathways
nio01240
Biosynthesis of cofactors
Module
nio_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NITINOP_1922 (thiC)
Enzymes [BR:
nio01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
NITINOP_1922 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CUQ66894
UniProt:
A0A0S4KUR0
LinkDB
All DBs
Position
1:complement(1848850..1850778)
Genome browser
AA seq
642 aa
AA seq
DB search
MDDRLNQHEAADGNEPGVSTAPVSTFPLSTQPFPASRKVHVEGAFPGVRVPMREISLTPT
RSTNGGGPTPNPPITVYDTSGPYTDPTVTIDLRAGLSPLRRRWVLDRGDVEELDQITSVY
GRQRATDPKLAHLRFRHIRKPLRAKPGRNVTQLHYARKGIVTPEMEFIAIRENQSREVAR
ELASRNGHGGGVAQHPGFAWGADIPAVITPEFVRDEVARGRAIIPSNINHPESEPMIIGR
NFLVKINANIGNSAVASSIEEEVEKMIWAIRWGSDTVMDLSTGKNIHETREWIIRNAPVP
IGTVPIYQALEKVGGKAEDLTWEIYRDTLIEQAEQGVDYFTIHAGVRLAYIPLTAKRMTG
IVSRGGSIHAKWCLAHHQENFAYTHFEEICEIMKAYDVAFSLGDGLRPGSIADANDEAQF
AELETLGELTKIAWRHDVQVMIEGPGHVPMHMIQANMEKQLKACHEAPFYTLGPLTTDIA
PGYDHITSGIGAAMIGWYGCAMLCYVTPKEHLGLPDREDVKAGVIAYKIAAHAADLAKGH
PGAQIRDNALSKARFEFRWEDQFNLSLDPDTARRFHDATLPDQAAKVSHFCSMCGPHFCS
MKITQDVRDYAAQKQIDEQRAIQIGMQEKADEFRKTGAEIYR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccgtctgaatcaacacgaagccgccgacggaaatgagccgggcgtgtcgacc
gcccccgtttcgacttttccactgagcactcaaccgtttcccgcttctcgaaaggtccat
gtggagggcgcgttcccgggagtccgggtgccgatgcgcgagatcagcctcactccgacg
cgatcgacgaacggcggcggaccgacccccaatccgccgatcaccgtctatgacacgtcc
ggcccctacacggatccgaccgtcacgatcgatctgcgggccggactgtcgccgttgcgg
cgccgatgggtgctcgatcggggcgacgtggaagagctcgaccagatcacgtcggtctat
ggccgccagcgcgccaccgaccccaaactcgcgcatcttcggtttcggcacatccgcaaa
ccgctgcgagcgaagcccggaagaaacgtcacgcaactccactatgcccgcaagggcatc
gtcacgccggaaatggaattcatcgccatccgcgaaaaccaatcgcgcgaggtcgccagg
gaactggcctcccgcaacgggcacggcggcggcgtggcgcaacatcccgggtttgcctgg
ggcgccgacatcccggccgtcatcacgccggagttcgtccgcgacgaggtggccaggggc
cgcgcgatcatcccgtcgaacatcaatcaccccgaaagcgagccgatgatcatcggccgc
aattttctggtgaagatcaacgccaacatcggcaactcggccgtcgcctcgtccatcgag
gaagaagtcgaaaaaatgatctgggccatccgctgggggtccgacacggtgatggacctc
tccaccggcaaaaacatccacgagacccgcgaatggatcatccggaacgcgccggtgccc
atcggcaccgtgcccatttaccaggcgctggagaaagtcggcggcaaggccgaagacctc
acttgggaaatctatcgagacaccttgatcgaacaggccgagcagggggtggattatttc
acgatccacgccggcgtgcggctggcctacattcctttgaccgccaagcggatgaccggt
atcgtctcgcgcgggggctcgatccatgccaagtggtgcctggcgcaccatcaagagaat
tttgcatacactcacttcgaggaaatctgcgagattatgaaagcctacgacgtggctttt
agtctgggcgacgggttgcgccccggctccatcgccgacgcgaacgacgaggcccagttc
gccgaactcgagacgctcggggaactgaccaaaatcgcctggagacacgacgtgcaagtg
atgatcgaaggaccgggccacgtgccgatgcacatgatccaagccaacatggaaaaacaa
ctcaaggcctgccacgaggcgcctttttatacgctggggcctttgacgaccgacatcgcc
cccggctacgaccacatcacctccggcatcggcgcggcgatgatcggctggtacgggtgc
gcgatgctctgttacgtgacgccaaaggaacatctgggcctgccggaccgagaggacgtc
aaggccggcgtgatcgcctacaagatcgccgcgcacgcggcggacttggcgaagggccat
ccgggggcgcagatccgcgacaacgccctgtccaaggcccgcttcgaattccgctgggag
gatcagttcaacctctcgctcgatcccgacacggctcgccggttccacgacgccacgttg
cccgaccaggccgcgaaggtctcccatttttgcagcatgtgcggaccccatttctgctcc
atgaagatcacgcaagacgtgcgggattacgcggcgcagaaacagatcgacgagcaacgg
gcgattcagatcggcatgcaagaaaaggcggacgagttcagaaagaccggagccgaaatc
taccgctag
DBGET
integrated database retrieval system
