Candidatus Nitrospira inopinata: NITINOP_2205
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Entry
NITINOP_2205 CDS
T04169
Symbol
pycB
Name
(GenBank) Pyruvate carboxylase, subunit B
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00020
Citrate cycle (TCA cycle)
nio00620
Pyruvate metabolism
nio00720
Other carbon fixation pathways
nio01100
Metabolic pathways
nio01120
Microbial metabolism in diverse environments
nio01200
Carbon metabolism
nio01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NITINOP_2205 (pycB)
00620 Pyruvate metabolism
NITINOP_2205 (pycB)
09102 Energy metabolism
00720 Other carbon fixation pathways
NITINOP_2205 (pycB)
Enzymes [BR:
nio01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
NITINOP_2205 (pycB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
HMGL-like
Biotin_lipoyl
Biotin_lipoyl_2
GCV_H
RnfC_N
HlyD_D23
NQRA_N
DUF3060
Motif
Other DBs
NCBI-ProteinID:
CUQ67177
UniProt:
A0A0S4KV09
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All DBs
Position
1:complement(2143184..2145133)
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AA seq
649 aa
AA seq
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MATTRSSGKKQRATTRSTAPNVTRSKPTALRRDESIIQPAPGKRLLITDVALRDGHQCLL
ATRMRTEDMLPIAQKLDSVGFWSLEVWGGATFDACLRYLKEDPWERLRALRAAMPNTKLQ
MLLRGQNLVGYRHYADDVLERFIERSAANGIDVFRIFDALNDVRNLERAVREVRACGKHV
EAAISYTVSPVHSLDRFVDLAKRLEDLGTDTLCVKDMAGLLSPFDAYHLIRRLKAAVSVP
IHLHSHDTAGMGAMSALMAVLAGLDILDTAMSPLSGGASHPPTESVVAALQRTPYDTGLD
LTDLQPIADHFRVVRRKYRQFESDFTGVDAAILTSQIPGGMLSNLAAQLAEQQALDRMKE
VLDEVPRVRKEMGYPPLVTPASQIIGTQATLNVLTGERYKVITTETKNYFLGLYGRAPGP
VDNEVMARAIGDEEPIKTRPADRLEPEMEAIKRELPDHSLEDQLSFALFPAIAREFFEAR
KKGELTPSPLEAASPKAPAVAHELHLAPVEFNVTVHGETYHVKVSGSGRKVDGRKPYYIR
VNDRLEEVSLEPIQEVFAGVPETHEADKTTKAKRPRPSQPGDVAPPMPGRVVKILVSVND
RVKAGDSLLVIEAMKMESRVPAPIDGTVTAIFVAEGENVKPDETVIQLQ
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacacgatcctcaggaaaaaaacagcgggcgaccactcgatcgaccgcgccc
aacgtcacacgatcgaaaccgaccgccttgcggcgggatgaatcgatcatccaacccgcg
ccgggaaaacgtctcttgatcaccgacgtcgcgttgcgcgacgggcaccagtgcctgctg
gccacccgcatgaggaccgaggacatgttgccgatcgcccagaaactcgactccgtgggg
ttctggtccttggaagtgtggggcggcgcgactttcgacgcctgtcttcgatacttgaaa
gaagacccctgggagcggctccgcgccctccgcgcggccatgccgaacaccaagctgcaa
atgttgctccgcggtcaaaacttggtcggctaccgccattacgccgacgacgtcctggag
cgattcatcgaacggtcggcggccaatgggatcgacgtcttccgtattttcgacgcgctg
aacgacgtccgcaacctcgagcgggcggtgcgggaagtgcgggcctgcggcaaacacgtc
gaggccgccatcagctacacggtcagccccgtgcatagtctcgaccgattcgtggacctg
gccaaacggttggaggatctgggcaccgatacgctctgtgtcaaagacatggccgggctc
ttgtccccgtttgacgcgtatcacctgatccgccggctcaaggcagccgtctcggtcccg
attcatctccactcccacgacacggccggcatgggcgcgatgtccgcgctgatggcggtg
ctggccggcctcgatatcctggacaccgccatgtcgcctctctccggcggcgcgtcgcac
ccgcccaccgaatccgtcgtcgccgcgctgcagcggactccctatgacaccggcctcgat
ctgaccgatctccagcccattgcggaccacttccgcgtcgtccggcgcaagtatcggcaa
ttcgagagcgacttcaccggagtcgacgcggcgatcctgacgtcacaaattcccggcggc
atgctgtcgaacctggccgcgcaactggccgaacaacaggcgctcgaccggatgaaagaa
gtgctcgacgaagtgccccgtgtcagaaaagagatgggctatccgccgctcgtcacgccg
gccagccagattatcggcacacaggccacgttaaacgtcctgaccggcgagcggtacaaa
gtgatcacgaccgaaaccaagaattactttctcggattgtacggacgggcgcccgggccg
gtcgacaacgaagtcatggcgcgcgccatcggagacgaagagccgatcaaaaccagaccg
gcagaccggctcgagccggagatggaagcgatcaagagagaactgccggatcactccctg
gaagatcaactctccttcgccctctttcccgccatcgcgcgggagtttttcgaggcgcgc
aagaaaggcgaactgacgccttccccgcttgaagccgcgtctcccaaggccccggccgtg
gcccacgaactgcatctggcgccggtcgagttcaacgtcaccgtgcacggtgagacctat
cacgtcaaggtatccggatcgggccggaaggtggacgggcgaaagccctattacatccgc
gtcaacgatcggttggaagaagtgtcgctcgaaccgatccaggaagtcttcgccggcgtg
ccggagactcatgaagccgacaaaaccaccaaggcgaagcgaccgcgaccgtcacaaccc
ggcgacgtggcgccgcctatgccgggccgggtcgtcaaaatcctggtgtcggtcaatgat
cgcgtcaaggccggcgattccctgctggtgatcgaggcgatgaagatggaaagccgcgtc
ccggcgccgatcgatggaaccgtgacggcgatttttgtggcggagggagaaaacgtgaag
ccggatgaaaccgtcatccagttgcaataa
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integrated database retrieval system
