Candidatus Nitrospira inopinata: NITINOP_2789
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Entry
NITINOP_2789 CDS
T04169
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
nio
Candidatus Nitrospira inopinata
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nio03110
]
NITINOP_2789 (clpC)
Chaperones and folding catalysts [BR:
nio03110
]
Heat shock proteins
HSP100
NITINOP_2789 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
TniB
AAA_14
IstB_IS21
nSTAND3
NBD_SMAX1
RsgA_GTPase
AAA_18
ATPase_2
bpMoxR
NACHT
AAA_7
Roc
Mg_chelatase
UVR
ResIII
Torsin
nSTAND1
DUF815
Zeta_toxin
T2SSE
HGD-D
Motif
Other DBs
NCBI-ProteinID:
CUQ67761
UniProt:
A0A0S4KTH2
LinkDB
All DBs
Position
1:complement(2728399..2730825)
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AA seq
808 aa
AA seq
DB search
MFERFTDKGRKIIILAREEAERHQNDYLGTEHLVLAILREADGIALMILKKMGLSTEQIR
LEIERNLPGGGTTMTFGEIPFSPRVKKVIEYGVEEARLLGHNHIGSEHLLLGLLREEEGI
GGKILRSLGANLLTARQLTVTFLRKSAPRERDRKSNTPALDEFGRDLTQLAQEGQLDPVI
GRADEIERVLQILSRRSKNNPVLIGESGVGKTAIVEGLAQRIVQSEVPDNLLSRRVIALD
LGSLVAGTKYRGQFEERLKVVMKEIVQAGNIIIFIDELHTLVGAGAAEGSIDASNMLKPA
LSRGEIQCIGATTLDEYRKHIEKDGALKRRFQPIYVQPPSVDETIQIINGLRDRYEEHHG
VEITEEAIVEAVKLSDRYITDRFLPDKAIDLIDETGSRAKLQTYALPSELKAMEQELKKV
SREKELSISMQNFEEAVRYREEEERLRKLLDESKREWKKSQEKNKPVIGKEDVAYVVSKM
TGIPLFKLEEEESNKLLRMEEFLHKRVVGQDEAISAVARAIRRSRAGLKEAKKPIGSFIF
LGPTGVGKTELARTLAEFLFNSEDALIRVDMSEYQEKFTSSRLFGAPPGYVGYEEGGQLT
EKVRRRPYSVVLFDEIEKAHPDVFNVLLQVLDDGVLTDSLGRKVDFKNTVVIMTSNIGTK
NIQKGVSLGFQSTEDEVARRKKEEVMGELRKSFSPEFLNRIDEIVIFHQLEKDHLYSILD
ILIRELNNRLLEKGIEIEVDDEVKQWLIKEGYEPLYGARPMRRAIQRAIGDPLSDELIRG
RFKECRKVKVVLRDGAPVFIQQEAMAGV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacgatttacggacaagggtcggaaaatcatcatccttgcgcgtgaggaagcc
gagcgacaccagaatgattacctggggacggagcatcttgtcttggccatcctgcgcgag
gcggacgggatcgccctcatgattttgaagaaaatggggctttctaccgagcaaattcgc
ctcgagattgagcgcaatctccctggaggggggacgaccatgacgttcggtgagatcccc
ttcagcccgcgcgtaaaaaaagtgatcgagtatggagtcgaggaagccagattattgggt
cataaccacatcggaagcgagcatctgctcctgggtctgctgcgcgaggaagagggcatc
ggcgggaaaatccttcgaagcttgggggccaatttgctgaccgcccggcaattgacggtg
accttcttgcgaaagtccgctcctcgcgagcgcgatcggaaaagcaatacgccggcgctg
gatgaattcgggcgtgacctgacccagttggctcaagagggtcaactggatccggtgatc
ggaagggcggatgaaatcgagcgggttcttcaaattctgagccgaagaagcaaaaataat
cccgtgctcatcggcgagtcgggggtgggcaaaaccgcgatcgttgaaggattggcccag
cggatcgtccagtccgaggttcccgataatctgctatccaggcgggtcattgccttggat
ttgggttcgttggtggccggcacaaagtacaggggccaatttgaagaacggctcaaggtc
gtgatgaaagaaatcgtgcaggccggcaacatcattattttcattgatgagcttcacacg
ttggtcggagccggggcggccgagggttctatagatgcgtcgaacatgctcaagccagct
ctctcgcgaggagaaattcaatgtatcggcgcgacgactttggatgaatacagaaagcat
atcgaaaaagacggggcgttgaagcggcggtttcagcctatttatgtgcagcctcccagt
gtggatgaaacgattcagatcattaatggcttgcgggatcggtatgaagagcatcatgga
gtcgaaattacggaagaagcgatcgtggaagccgtcaaactttccgatcgatacatcacg
gatcggtttttgcccgataaagcgatcgatttgatcgacgagaccggctcgcgtgccaag
ctgcagacgtatgcgcttccgtcggaattgaaagcgatggaacaagaactcaaaaaagtg
tctcgggaaaaagagctgtcgatttccatgcagaattttgaggaagccgttcgttatcga
gaagaggaagagcggctgcgcaaactgttggacgagtcgaagcgggaatggaaaaagagc
caagagaagaacaagcccgtcatcggcaaagaagacgtcgcctatgtggtttccaagatg
accggcattccgctttttaagctggaagaagaagagtctaacaagctgctgagaatggaa
gagtttctccataaacgcgtcgtcggccaagatgaggccatttcagcggttgcccgagcg
attcggcggtcgcgcgccggtttaaaagaggccaagaagccgatcggttcattcatcttt
ttgggacccacaggggttggaaagaccgaactggcgaggacgttggcggagtttctcttc
aacagcgaagacgcattgattcgggttgacatgtcagaatatcaggagaaattcaccagc
tcgcgactttttggcgctccgcccggctacgtaggttacgaggaaggggggcagctcacc
gaaaaggttcggcgccggccctattcggtcgttctgttcgatgaaattgaaaaggcacat
cctgacgttttcaacgtcttgcttcaagtgctggacgatggagtgttgacggatagcctg
ggtcgaaaggtggacttcaagaacacggttgtcattatgacatccaatatcgggacaaag
aacatccagaagggagtttcgctgggattccaaagcaccgaagatgaagtcgcccgccga
aagaaggaagaagtgatgggggagctgcgcaagtcgttcagcccggagtttttgaaccga
atcgacgaaatcgttatcttccatcaattggagaaagaccatctgtatagcattctggac
attttgattcgggagctgaacaaccgccttcttgagaagggaattgaaatagaagtcgat
gacgaagtgaagcaatggcttatcaaagaggggtacgaaccattgtacggagcgaggccg
atgcgccgagcgattcagcgggcgatcggcgatcctctctccgacgagctcatccgcggc
cgcttcaaagagtgtcgaaaggtcaaagtggtgcttcgggacggtgcgcctgtctttatt
caacaagaagcgatggcaggtgtgtag
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