Candidatus Nitrospira inopinata: NITINOP_2878
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Entry
NITINOP_2878 CDS
T04169
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00220
Arginine biosynthesis
nio00240
Pyrimidine metabolism
nio00250
Alanine, aspartate and glutamate metabolism
nio01100
Metabolic pathways
nio01110
Biosynthesis of secondary metabolites
nio01240
Biosynthesis of cofactors
Module
nio_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NITINOP_2878 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NITINOP_2878 (carB)
00220 Arginine biosynthesis
NITINOP_2878 (carB)
Enzymes [BR:
nio01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NITINOP_2878 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
MGS
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
GARS_A
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
Xre-like-HTH
DUF433
Motif
Other DBs
NCBI-ProteinID:
CUQ67850
UniProt:
A0A0S4KX98
LinkDB
All DBs
Position
1:complement(2809545..2812829)
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AA seq
1094 aa
AA seq
DB search
MPKRTDIRSVLIIGSGPIVIGQACEFDYSGTQACKALKEEGYRVILINSNPATIMTDPEM
ADRTYVEPITVDVVEAVIERERPDALLPTMGGQTALNTTMGLVKKGVLDKYGVKLIGASA
EAIHKAEDREAFKAAMQRVGLRVPKSGTAHSRAEATALLETVGFPAIIRPSFTMGGTGGN
IAYNREEFVKLIDWALAMSPVSQVLIEESVIGWKEYELEVMRDLKDNVVIVCPIENLDPM
GVHTGDSITVAPAMTLTDKEYQRMRDAALTIIREIGVETGGSNIQFGVNPENGDMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEITNDITGVTKASFEPAIDYVVVKIPR
FAFQKFKGADPTLTTQMKSVGEAMAIGRTFKEALQKAIRSLELELNGLASRMGIDRGLPA
GANRDEMIANVRRLLRAPLAERLWYLADGIRLGLGSEELFAITKIDPWFIEQVRELVEFE
RGLVGRAEELAAGLNTAMNGWLWEAKRLGFSDDRIGRLLGVDAASVRRARMGGEKETPSA
ADRRPVTYKRVDTCAAEFEAHTPYLYSTYGSECEARPSDRKKVMILGGGPNRIGQGIEFD
YCCVHAAMALREEGVETIMVNCNPETVSTDYDTSDRLYFEPLTEEDVLNIVRTEQPMGVV
LQFGGQTPLKLALPLSRAGVRILGTSPDAIDLAEDRERFRDLLMKLGLRQAESGMARSLE
EADRVAEALGYPVMVRPSYVLGGRSMQIVYDHAGLMEYMKSAVKASPDHPVLIDKYLSDA
IEVDADAISDGKTVVVAGIMEHIEEAGVHSGDSACSLPVYTLDKAVVREIERQMKLLAKA
LGVVGLMNAQFAVKNGTVYILEVNPRGSRTVPFVSKAIGVPLTKLAMKVMLGRTLDELGF
TSPPQPAHMSVKEAVFPFTKFAGVDVLLGPEMKSTGEVMGIDEDFGWAFAKSQAGAGAAL
PKSGTAFISVRAADRPAALEVARRLRAVGFHIQATTGTAHYLREHGVEAAMVNKVSEGRP
HIVDHIKNGEVALVVNTVQTASAHSDSISIRREALQKGLSYYTTMRGAMAAVLGIEAIVK
KGLSIRSLQEYHRP
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgcacagacatccgctccgttctgatcatcggctccggaccgatcgtcatc
ggccaggcctgcgagttcgactattccggcacgcaggcgtgcaaggcgctcaaggaagaa
ggctatcgggtcattctcatcaacagcaatcccgccacgatcatgaccgatccggagatg
gccgaccgcacctacgtggaaccgattaccgtggacgtcgtcgaggccgtgatcgagcgg
gaacggcccgacgcgttgctgccgacgatgggcgggcagacggcgctcaacacgaccatg
ggattggtcaaaaagggggtgctggacaaatacggcgtcaagctgatcggcgcgtcggcc
gaggccattcacaaggcggaagatcgcgaagccttcaaggcggcgatgcagcgggtcggg
ctgcgcgtgcccaagagcggcacagctcacagccgcgcggaggcgacggcgctgttggaa
acggtcgggtttcccgccatcatccggccttcgtttacgatgggcggaaccggcggcaat
atcgcctacaatcgcgaggagttcgtcaaactgatcgattgggcgttggccatgagcccc
gtgagccaggtgttgatcgaagagtcagtcatcggatggaaggaatacgagctggaggtg
atgcgcgatctcaaagacaacgtcgtgatcgtctgtccgatcgaaaatctcgatcccatg
ggcgtccacaccggagacagcatcaccgtcgcgccggccatgacgttgaccgacaaggaa
taccagcggatgcgggacgcggcgctcacgatcatccgggaaatcggcgtcgaaacgggc
ggctcgaacatccagttcggcgtgaaccccgagaacggcgacatggtcgtcatcgagatg
aatccccgcgtctcccgaagctcggcattggcgtcgaaggcgaccggatttccgatcgcc
aagatcgccgccaagctggcggtcggctacacgttggatgaaatcacgaacgacatcacc
ggagtcacgaaggcgtccttcgagcccgcgatcgactacgtggtcgtgaaaattccgcgg
ttcgcctttcagaagttcaaaggcgccgacccgaccctcacgacgcagatgaagtcggtc
ggggaggccatggcgatcgggcggacgttcaaggaagcgttgcagaaggcgattcgatcg
ttggagctggagctgaacggattggcctcgcgcatgggaatcgatcgggggcttccagcg
ggggcgaatcgggacgagatgatcgcaaacgtccgtcgcctgttgcgcgcgccgcttgcg
gaacggctgtggtatctcgccgacggcattcggttgggactcggctccgaggagcttttc
gccatcaccaaaatcgatccctggttcatcgagcaggtgcgggaattggtggaattcgag
cggggactcgtcggcagggcggaagagctggcggccggtctcaatacggcaatgaacgga
tggctctgggaggccaagcgactgggattctcagatgaccggatcggccggctgttgggg
gtcgacgcggcttccgtccgccgggcgcgcatgggaggtgaaaaagagacgccgtccgcg
gccgatcgccggcccgtcacgtacaagcgggtcgatacctgcgcggcggagtttgaagcc
catacgccgtatctgtattccacctacggaagcgagtgcgaggccaggccgtccgatcgg
aagaaggtgatgattcttggcggcgggcccaatcggatcgggcaggggatcgagttcgac
tattgttgcgtccacgcggccatggcgctcagggaagaaggggttgagacgatcatggtc
aactgcaatcccgagacggtcagcacggactatgacacgtcggaccggctttactttgag
ccgttgaccgaagaggacgtattgaatatcgtgcgcacggaacaaccgatgggcgtggtg
ctccagttcggcgggcagacgccgttgaaactggcgcttcccctgtccagagccggcgtc
agaatcttgggcaccagcccggacgccatcgatttggccgaggatcgcgagcggtttcgg
gatcttttgatgaagctcggtctgcgccaagccgaaagcggcatggcacggtcccttgaa
gaggcggatcgggtggcggaggcgctcggttaccccgtgatggtgcgtccttcctacgtg
ctcggcggtcggtcgatgcaaatcgtctatgaccatgcggggttgatggagtacatgaag
tccgccgtcaaggcgtctccagaccatcccgtcctgatcgacaagtatttgtccgatgcc
atcgaagtcgacgccgatgcgatttcagacgggaagacggtcgtcgtggccggcattatg
gagcatatcgaagaggccggcgtccattccggggactcggcctgttcgctgccggtctat
acactggacaaggccgtcgtgcgcgagattgaacgacagatgaaactcttggccaaggcg
ttgggagtggtcgggctgatgaacgcccaattcgccgtgaagaacggaaccgtctatatc
cttgaagtcaatccgcggggatcgcgcaccgtaccttttgtcagcaaggcgatcggagtg
cccctgacgaagttggccatgaaggtgatgctggggcgcacgctggatgaactcggcttc
acgtcgccgccgcaaccggcccacatgtccgtcaaggaagcggtctttccgttcacgaaa
ttcgccggcgtcgacgtgctcttgggcccggagatgaaatcgaccggggaagtgatgggc
atcgacgaggacttcgggtgggccttcgcgaaatcccaggcgggagccggagccgcgctc
ccaaagtcgggcactgcctttatcagcgtcagggcggcggatcgaccggcggccttggaa
gtggccaggcgtctccgggccgtcggctttcacattcaggcgacgaccggcacggcgcat
tatttaagagagcacggagtcgaggcggcgatggtcaacaaagtgagcgaaggccggccg
cacatcgtggatcacatcaaaaacggagaggtggcgctcgtggtcaacacggttcagacc
gcctcggcccattccgattccatttccatccgcagggaggccttgcaaaaggggctgtcg
tactatacgaccatgcgcggcgcgatggccgccgtccttggcatcgaggcgatcgtgaag
aaagggctatccatccgttcgttgcaggagtatcatcggccctaa
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