Candidatus Nitrospira inopinata: NITINOP_3112
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Entry
NITINOP_3112 CDS
T04169
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6 dehydratase, NAD(P)-binding
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00521
Streptomycin biosynthesis
nio00523
Polyketide sugar unit biosynthesis
nio00525
Acarbose and validamycin biosynthesis
nio00541
Biosynthesis of various nucleotide sugars
nio01100
Metabolic pathways
nio01110
Biosynthesis of secondary metabolites
nio01250
Biosynthesis of nucleotide sugars
Module
nio_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NITINOP_3112 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NITINOP_3112 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
NITINOP_3112 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NITINOP_3112 (rmlB)
00525 Acarbose and validamycin biosynthesis
NITINOP_3112 (rmlB)
Enzymes [BR:
nio01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NITINOP_3112 (rmlB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
CUQ68084
UniProt:
A0A0S4L0D3
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All DBs
Position
1:complement(3018310..3019464)
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AA seq
384 aa
AA seq
DB search
MKEFPSSARALGRKLTLEEKAPVRISEKGKPQMILVTGGAGFIGSNFVLHWLEQVGEPVV
NLDKLTYAGNLDNLAGLNGDERHLFVRGDIGDTALVPSLLDRHQPRAVVNFAAESHVDRS
IHGPDDFIRTNVVGTFHLLEAVRAYWMKLDPTAQVSFRFLHVSTDEVYGSLESHEPAFRE
TNPYRPNSPYSASKAAGDHLVRAYHHTYGLPVLTTNCSNNYGPYQFPEKLIPLVIHNALA
GKPLPIYGDGRQVRDWLYVEDHCRAICRVLESGVPGETYNVGGWSEKHNLDVVDTICGIL
DEWRPRSDGRSYRAQVTFVKDRPGHDRRYAIDATKIERELGWKPAETFETGIRKTVRWYL
DHDTWVRNVTSGDYRRWIEQHYTQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggaatttccgtcgtccgctcgggctcttggacgcaagcttacattggaagaaaaa
gcacccgtgcggatctcggagaaggggaaaccgcagatgatattagtgacgggcggggcc
ggattcatcggatcgaattttgtcctgcactggctggaacaggtcggcgaaccggtggtc
aatctcgataagcttacctacgcgggcaatcttgataatctggccggcttgaacggcgac
gagcgacacctgttcgttcgcggcgacatcggcgatacggcgttggtcccttcgctgctc
gatcgccatcagcctcgcgccgtcgtcaactttgccgccgagagtcacgtggatcgatcg
attcacggacccgatgatttcatccgcacgaacgtggtcgggacgtttcatctgctggaa
gcggtgcgagcctattggatgaagctcgatccgacggcgcaagtgtcgtttcggtttctt
cacgtgtcaacggatgaagtgtatgggtcgcttgagtcgcatgagccggcgtttcgcgaa
acgaatccctatcggcccaacagcccctattcggccagtaaggcggccggcgatcatctc
gtgcgcgcctatcaccatacctacggcctgccggtgctgacgacgaattgttccaacaac
tacgggccctatcagtttcctgaaaaactgattcctctcgtgattcacaatgcgttggcc
ggcaaaccgttgccgatctatggcgacggccggcaggtgcgcgattggctgtacgtggaa
gaccattgtcgggcgatctgtcgggtgctggagagcggtgtgccgggagaaacgtacaat
gtcggcggatggagcgaaaaacataatctggacgtggtggataccatctgcgggattttg
gacgaatggcgccctcgaagcgacgggcggtcgtaccgggcacaggtgaccttcgtcaaa
gatcggcccggtcatgaccggcggtacgccatcgacgcaacaaagatcgagcgagaactc
ggctggaagccggccgaaacgtttgaaaccggcattcgtaaaaccgtccgttggtatttg
gatcatgacacgtgggtgcggaacgtgacgagcggagactaccgccgctggatcgagcag
cactacacgcaataa
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