Candidatus Nitrospira inopinata: NITINOP_3206
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Entry
NITINOP_3206 CDS
T04169
Symbol
apxIB
Name
(GenBank) Toxin RTX-I translocation ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio02010
ABC transporters
nio03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NITINOP_3206 (apxIB)
03070 Bacterial secretion system
NITINOP_3206 (apxIB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nio02000
]
NITINOP_3206 (apxIB)
02044 Secretion system [BR:
nio02044
]
NITINOP_3206 (apxIB)
Transporters [BR:
nio02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NITINOP_3206 (apxIB)
Secretion system [BR:
nio02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NITINOP_3206 (apxIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_29
nSTAND3
AAA_16
ABC_ATPase
NB-ARC
MeaB
AAA_22
AAA_30
AAA_18
AAA_21
Zeta_toxin
DUF87
Motif
Other DBs
NCBI-ProteinID:
CUQ68178
UniProt:
A0A0S4L2A8
LinkDB
All DBs
Position
1:complement(3107175..3109358)
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AA seq
727 aa
AA seq
DB search
MPDDANAASPSDSSQPSSAVADTGLLCLLILARFYDLPADASQLRHQFARLNEPLSPTDL
VRAAKHLGLKAGRITVRWDKLPTLPLPAMVRRADGRYLVLAKADEQKVLVQDPVEARPLV
LSRDRFEALWSGEVLLFTKRAHLRPQDLKFDFAWFIPAIVKYRKLLGEVLVASFVLQLFG
LLTPLFTQVVIDKVLVHRGFTTLHVLAIGMVALVIFEAVLGGLRTYLFAHTTNRIDVGLG
AQLFRHILALPLAYFEARRVGDTVARVRELEHIRQFLTSNSVTVVLDLFFMAVFLAVMWL
YSPMLTLVVAASLPFYAGLSLVITPAIRARLHEKFNRGAENQAFLVETVTGIQTVKAMAV
EPPLQRRWDEQLAGYVRASFRATNLITIAGQAATAVQKLTTVAILWVGAYRVIGGELSIG
QLIAFNMLAAQVTGPLLRLVNLWQEFQQVGISVQRLGDVLNAQPEPSYNPNRTTLPRVAG
RVSFEDVTFRYRPDGPEVLRKVSFVVEPGQVVGLVGRSGSGKSTIAKLIQRLYVPERGRV
LVDGVDLAQVDPAWLRRHVGVVLQENFLFNRSVRDNIALTDPGSSMERVIQAAKLAGAHE
FILELPEGYDTVIGEQGCSLSGGQRQRIAIARALIADPRILIFDEATSALDYESEAVIQR
NTALIAKGRTVIIIAHRLSTVRPAHRIYVVERGEIIEQGSHDELLRAGGLYARLHAYQTR
VAGGYGG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgacgccaacgccgcttctccgtctgattcatcccagccgtcttcggcggtc
gcggacaccgggttgctctgtctgctgattctcgctcggttctacgacctgcccgccgac
gcgtcgcaactgcgccatcagttcgcgcggttgaacgagcctctgtctccgacggatctc
gtgcgcgccgcgaaacatttggggctcaaggcgggccgcataacggtcaggtgggacaag
ttgccgactcttccgcttcccgccatggtccggcgggccgacggccgttacctggtcttg
gccaaggccgacgaacagaaggtgttggtgcaggacccggtcgaggcgcgtccgctggtc
ctgtcccgcgaccggttcgaggcgctttggagcggcgaagtgctgctctttacgaaacgg
gcccatctgcgtccgcaggatctgaagttcgacttcgcttggttcatccccgccatcgtc
aaatatcgaaagttgctcggcgaggtgctggtcgcttcgtttgttcttcaactgttcggt
ctgctgactccgctgttcacgcaggtcgtgatcgacaaggtgctggtgcacagggggttc
acgacgctccacgtgctcgcgatcggcatggtcgcgctcgtgatcttcgaggcggtcctc
ggcggcctccgcacctacctcttcgcccatacgacgaaccgcatcgacgtggggctcggc
gcgcaactgttccgccacatcttggcgctgccgctcgcctacttcgaggcgcggcgggtc
ggcgacacggtggcccgcgtccgcgagctggagcacatccgccagtttctgacgagcaac
tcggtcacggtggtgctcgacctgtttttcatggccgtctttctcgccgtgatgtggctg
tacagtccgatgctcacgctggtcgtggctgcatcgttgcctttctatgccgggctgtct
ctcgtcatcacgccggccatccgagcccggttgcacgagaagttcaatcggggagcggag
aaccaggcgtttctcgtggaaacggtcaccggcatccagaccgtgaaggcgatggccgtc
gagcctccgttgcagcggcggtgggacgagcagttggccgggtacgtgcgggcgagtttc
cgcgcgaccaacttgattacgatcgccggacaggcggcgaccgccgtccaaaaactcacg
acggtggccattctctgggtcggcgcctatcgggtcatcgggggcgagctcagcatcggg
cagttgatcgccttcaacatgctggcggcgcaagtgacgggaccattgttgcggctcgtg
aacctgtggcaggagtttcagcaggtggggatttccgtgcaacggttgggcgacgtgctc
aacgcccagccggagccgtcctacaatccgaatcggacgacgttgcctcgcgtggcggga
cgcgtctcgttcgaagatgtgacgttccgctatcggcctgacgggccggaggtgctgcgc
aaagtttcgttcgtcgtggagccggggcaggtggtcggcttggtggggcgatccgggtcc
gggaagagcacgatcgcgaaattgattcaacggctctacgtgccggagcggggccgcgtg
ctggtggacggcgtggacttggcgcaggtcgatccggcctggttgcgccggcacgtcggc
gtggtgttgcaggagaactttctcttcaaccgatcggtgcgcgacaatatcgcgctgacc
gatcccggctcgtccatggagcgggtgattcaggccgcaaagctggccggggcgcacgaa
ttcattctggagttgccggagggatacgacacggtgatcggcgaacagggctgttcgctg
tccggcggacagcgccagcggatcgcgatcgcgcgggcgttgattgcggatccgcgcatc
cttattttcgacgaagcgaccagcgccctggactatgaatccgaagccgtcatccagcgc
aacacggcgctgatcgccaaggggcgaacggtgatcatcatcgcccaccggttgagcacg
gtgcggccagcccaccggatctacgtcgtcgagcggggagaaatcatcgagcaaggttct
catgacgaattgctgcgggccggcgggttgtacgccaggctccacgcctaccaaaccagg
gtggccggaggatacggaggttga
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integrated database retrieval system
