Candidatus Nitrospira inopinata: NITINOP_3226
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Entry
NITINOP_3226 CDS
T04169
Name
(GenBank) Farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00100
Steroid biosynthesis
nio00909
Sesquiterpenoid and triterpenoid biosynthesis
nio01100
Metabolic pathways
nio01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
NITINOP_3226
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
NITINOP_3226
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nio01006
]
NITINOP_3226
Enzymes [BR:
nio01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
NITINOP_3226
Prenyltransferases [BR:
nio01006
]
Terpene biosynthesis
Squalene/phytoene synthase
NITINOP_3226
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
CUQ68198
UniProt:
A0A0S4KZX4
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All DBs
Position
1:complement(3131152..3132285)
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AA seq
377 aa
AA seq
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MLDRVHPASDSIREKRRGEEGETEGKPRGRAAMAASSKRALLHDLLKRVSRLFFTTLAVV
PANVRDQVGLAYLFARAADTIADTDIIERHRRLELLGRFRDQFADDRIVWERLRDVQRAV
APFQPESAERVLLERLDECFRLFLDFSPDDRRRVRRLMTTLTQGMEMDLRAFPGRSAEDL
AALKTLDELDLYTYHVAGCVGEFWTDLMCAHRKALASWNVQDMASIGVRFGKGLQLTNIV
KDLAHDLQKGRCYVPEPMLAEAGLKPRDLLDQANLPRFRPVLTKLVRMAVEHLDQGWLYT
MAVPRYETRLRLSCMWPILSAGESLKLVLQSPDLLNPAVKVKIPRSKVYRIMAMTTGTVA
CGYAGTAYWGHLRKQLA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccgtgttcatccggcctccgattccatccgggaaaagcggcgcggagaagaa
ggggaaaccgaggggaagccgagagggagggctgcgatggccgcctcgtccaaacgcgcg
cttcttcacgatcttcttaaacgggtatcgaggctcttttttacgacgttggccgtcgtt
cccgcaaacgtgcgggatcaagtcggtctggcctacctcttcgcacgcgccgccgacacg
atcgcggacacggacatcattgagcggcatcggcgattggagctgctcggtcgcttccgg
gaccaattcgccgacgatcgcattgtctgggaacggctccgagacgttcaacgcgcggtc
gcgccgtttcagcctgagtcggcggagcgtgttctgctcgaacgactggatgaatgtttc
cggctgtttcttgatttctctccggacgaccgtcgccgggttcggcggctcatgacgacg
ctcacgcaaggaatggagatggatttgagggcattccccggccgatccgccgaagacctt
gcggctctcaagacgcttgacgaactcgacctctatacctatcacgtggccggctgtgtg
ggagagttttggacggatctgatgtgcgcccatcggaaggcgttggcatcctggaatgtg
caggatatggcgtcaatcggcgtgagatttggaaaagggcttcaattgaccaacatcgtc
aaagacctcgcgcacgatcttcaaaaagggcgatgttacgtgcccgagccgatgttggcc
gaggcggggctgaagccgcgcgatctcttggatcaagctaatcttcctcgtttcaggccg
gtgttaaccaagctcgtgcgcatggcggttgaacaccttgatcagggttggctctatacc
atggcggttccccgctacgagacaaggctcaggctctcctgcatgtggccgatcctctcg
gcaggcgagtctctcaaactggtgctgcaatctcccgacctcttgaatcccgccgtcaag
gtgaaaatcccgcgcagcaaggtctatcggatcatggccatgacgaccggcaccgtcgcc
tgcggctatgccggcacggcctactggggccatctgcgcaaacaacttgcgtga
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