Candidatus Nitrospira inopinata: NITINOP_3237
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Entry
NITINOP_3237 CDS
T04169
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nio
Candidatus Nitrospira inopinata
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nio03051
]
NITINOP_3237 (pafA)
Enzymes [BR:
nio01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
NITINOP_3237 (pafA)
Proteasome [BR:
nio03051
]
Prokaryotic proteasome
Bacterial regulatory particles
NITINOP_3237 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Enkurin
Motif
Other DBs
NCBI-ProteinID:
CUQ68209
UniProt:
A0A0S4KUZ5
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All DBs
Position
1:complement(3139457..3140851)
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AA seq
464 aa
AA seq
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MAGTGPMKQRIFGLENEYGLIFSPNGRIYLPMEKVLGYIFEGLIPNSWPSNAFLVNGARF
YQDTGCHPEYSTPECDNILDLVTHDKAGERLLEACLPAAEERLREEGLSGEIYIFKNNTD
SLGNTYGCHENFLMRRDVDFWKVTEQLIPFFVTRQVFSGAGKVLKVSGKPQYFISQRAQH
IHEKTSSSTTSSRSIINTRDEPHADAERYRRLHIIVGDSNMSEFATYLKVGTAALVLSMI
EEGYLVHGVELEDPVKAIREIARDPTLKKKVRLDDARYMTAIEIQRVYLERARQYLDQEE
HDATLDDVYAKWEAVLRQLEEDPMQLAHQIDWVTKKHLIQSYVDKKECGWDDPRVLLLDL
QFHDVKRTRGLYYLLESRGLVERIVQEDAVQRAMSTPPQTTRAKVRGDFIRFARAKNRSY
TVDWTYLKLNGYWEETILCMDPFSAVNRRVEELLSQMPGGRFHR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggccggcacaggtccgatgaaacaaagaattttcggtctcgaaaacgagtacggcctc
atcttttcgcccaatgggagaatttatctccccatggaaaaggtcctgggctacatcttc
gaggggctgatccccaatagttggccgtcgaacgcctttctcgtcaacggtgcgaggttc
tatcaggacaccggatgccatccggaatactccacccctgaatgcgacaacattcttgat
ctggtgactcacgacaaggccggcgagcggctgctggaggcctgcctgccggccgccgag
gagcggcttcgcgaagaaggattgtcgggcgaaatttacattttcaagaacaacaccgat
tcgctgggcaacacctacgggtgtcacgagaattttctcatgcggcgggacgtcgatttc
tggaaagtcacggagcaattgatcccgtttttcgtgacgaggcaggtgttcagcggggcg
ggaaaggtcctcaaggtgtccggcaagccccagtatttcatttcccaacgagcgcagcac
attcacgaaaagacctcctcctccacgacgtcgtcccgcagcatcatcaacacgcgcgac
gagccgcacgccgacgcggaacgctaccggcggctgcacatcatcgtgggagattccaac
atgtcggaattcgccacgtatctcaaggtggggacggcggcgctggttctgtcgatgatc
gaagagggctatctggttcatggagtggagctggaggaccccgtgaaggcgattcgcgaa
atcgcaagggatcccaccctcaagaaaaaagtccggcttgacgacgcccgctacatgacc
gccattgagatccagcgggtctatttggagcgcgcgcggcagtatctggaccaggaagaa
cacgatgcgacgctcgacgacgtgtatgccaagtgggaggcggtgctccgtcagttggaa
gaagatcccatgcagttggcgcatcaaatcgactgggtgaccaagaagcacctgattcaa
tcatatgtggacaagaaagagtgcggatgggatgatccccgcgtcttgctgttggatttg
caattccacgacgtgaagcgcacaagaggattgtactacttgttggaatcgcgcgggttg
gtcgagcggatcgtgcaagaagacgccgtgcaacgggccatgtccacgcctccgcagacg
accagagccaaggtgcgaggagatttcattcggttcgcaagggcgaagaaccgttcctac
acggtcgattggacctatttgaagttgaacggctactgggaggagacgattctctgcatg
gatccgttcagcgccgtgaatcggcgggtcgaggaattgctgtcgcagatgccgggaggg
cggtttcaccgatga
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