Nitrosopumilus sp. K4: NsoK4_01780
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Entry
NsoK4_01780 CDS
T07707
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
nip
Nitrosopumilus sp. K4
Brite
KEGG Orthology (KO) [BR:
nip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nip03400
]
NsoK4_01780
DNA repair and recombination proteins [BR:
nip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NsoK4_01780
Archaeal homologous recombinant proteins
NsoK4_01780
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Ortholog
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GFIT
Motif
Pfam:
Metallophos
Metallophos_2
CENP-C_C
Motif
Other DBs
NCBI-ProteinID:
QUC65029
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All DBs
Position
complement(310356..311498)
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AA seq
380 aa
AA seq
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MLFSHISDTHLGLVQYGSEEREQDVYHVFNQAIDTSIKDHVDFVIFAGDIFHVPNPNGTA
IVQMANALKRLKQNNIDSFFILGEHDISRIRTTPIPYVYHNLEFSRYIGQGKPIEYKKIL
LAGFDKIRKAEIPQFEKKFAEVNSIAKDHSGHKILVMHQGISEFNKFAGELLSTDLPKDF
TYYAMGHLHDKDIQQFNHLNGPVAYPGSIELTTSEGIKEARKGFFEVDISTQEANPNWIE
LDTRQQFSFKTEYEKLSETIDEISKKISDIQRKPILEIKIQGEKIETDYIQAQISRLQAL
TLRCFWRITTKEISESSVFLDRPNVIDDEMFRLSVDALGSEENANFAVKELLPLLSTGQI
KEASQIIVENFEKFKKEKQK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgttattttcacatatttcagacacgcatttaggtttagtccagtatggctctgaagag
cgagaacaagatgtgtatcatgtttttaatcaggcaattgatacttcaataaaagatcat
gtggattttgtaatatttgcaggagatatttttcacgttccaaatccaaatggaacagca
attgttcaaatggcaaatgcactaaagagactaaaacaaaacaatatcgattcatttttt
attttaggagagcacgatatcagtagaattcgtaccacaccaattccatatgtttatcac
aacttagaattttcaagatacataggacaaggaaaaccaatcgaatacaaaaaaattcta
ttggcaggatttgacaagattagaaaagcagaaattcctcaatttgaaaaaaagtttgca
gaagtcaatagcatagcaaaagatcattcaggccacaaaattttggtaatgcatcaagga
atttcagaatttaacaaatttgcaggagagttattatcaactgacttgccaaaggatttc
acatattatgcaatgggacatttacatgataaagatattcaacaatttaatcatctaaat
ggacctgtagcatatccagggtctatcgaattaacaacaagtgaaggaattaaagaagca
agaaaagggttttttgaagtagacatttcaactcaagaagccaatccaaactggatagag
ttggatacaagacaacagttttcattcaaaacagaatatgaaaaactgtcagaaacaatt
gatgaaatttcaaagaaaatttcagatattcaaagaaagccaattttagaaataaaaatc
caaggagagaaaatcgaaacagactatattcaggctcagatttcacgcctacaggcacta
actttgaggtgtttctggagaattacgacaaaggaaatatcagaatcatcagtattttta
gacagaccaaatgttatcgatgatgagatgtttcgattatcagttgatgcattaggatct
gaagagaatgcaaattttgcagtaaaggaattacttccgctattatcaacaggtcagatt
aaagaggcatcacaaattattgtggaaaattttgagaaattcaaaaaggagaaacaaaaa
tga
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