KEGG   Nitrosopumilus sp. K4: NsoK4_04875
Entry
NsoK4_04875       CDS       T07707                                 
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
nip  Nitrosopumilus sp. K4
Pathway
nip03030  DNA replication
nip03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NsoK4_04875
   03410 Base excision repair
    NsoK4_04875
   03450 Non-homologous end-joining
    NsoK4_04875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nip03032]
    NsoK4_04875
   03400 DNA repair and recombination proteins [BR:nip03400]
    NsoK4_04875
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nip04147]
    NsoK4_04875
DNA replication proteins [BR:nip03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    NsoK4_04875
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     NsoK4_04875
DNA repair and recombination proteins [BR:nip03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NsoK4_04875
Exosome [BR:nip04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   NsoK4_04875
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc Caprin-1_dimer
Other DBs
NCBI-ProteinID: QUC65569
UniProt: A0A8B2HYK8
LinkDB
Position
803971..804993
AA seq 340 aa
MGLNLKGLVDKEKTKLESFANKVIAIDAYNAIYQFLAIIRGPDGMQLSDSEGRITSHLSG
LLYRNINFLSLGIKPVYVFDGKPPSLKTAEIERRKQIKKDATVKYEKAIAEGNLEDARKF
AQQTTSMKDGMVEDSKTLLKHFGIPYIDAPSEGEATAAHLTNTGQAYASASQDYDSILFG
AKRLVRNFTNSGRRKIPNRNSYIDIEPEIIETQKILDSLEITREELVDVGILIGTDFNPD
GFERIGPKTALKMIKQHSRLEDIPQIQEQLNEIDYEQIRKIFLEPQVAKVEEIKFDEVNY
NAITNYLVNERSFSEDRIQSSLNRLKKALEKKSQNLDQWF
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgggtctgaatctgaaaggactagtagacaaagaaaaaacaaagttagagtcatttgca
aacaaagtcatagcaattgatgcatacaatgcaatttaccaatttttggctataatccga
ggtccagatggcatgcaattatcagattcagaggggagaatcaccagtcatctgagtgga
ttattgtatagaaatatcaatttcttgtctctaggaataaaaccagtgtatgtatttgat
ggaaaaccaccgtcactaaagacagcagagatagaaagaagaaagcagatcaaaaaggat
gctactgtaaaatatgaaaaagccattgcagagggaaatctagaagatgcaagaaaattt
gcacagcagacaacaagcatgaaagatggcatggtagaagactctaagacgcttttgaag
cattttggaattccatatattgatgcaccatcagaaggagaagcaactgcagcacatttg
acaaacacaggacaggcatatgcatctgcaagtcaagattacgattcaattttgtttggt
gcaaaaagactagtaaggaattttacaaacagtggaagaagaaaaattccaaacagaaat
agctacatagacatagaaccagaaattatcgaaacacagaaaattctagattcattagaa
attacaagagaagagttagtagatgtaggtattttgatcggtactgattttaatccagat
ggttttgaaagaataggcccaaagacagcattgaaaatgatcaaacagcattcaagacta
gaagacattccgcaaatacaagaacaattaaacgaaatagactacgagcaaatcagaaaa
atattcctagagccacaagtggcaaaagtagaggaaataaaatttgacgaagtcaactat
aatgcaataacaaattatctagtaaatgagaggagtttttcagaagacagaattcaatct
tccctgaatagattaaaaaaagcactagaaaagaaaagccaaaatctagatcagtggttc
tag

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