Nitrosopumilus sp. K4: NsoK4_04960
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Entry
NsoK4_04960 CDS
T07707
Name
(GenBank) arginine--tRNA ligase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
nip
Nitrosopumilus sp. K4
Pathway
nip00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nip00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NsoK4_04960
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nip01007
]
NsoK4_04960
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nip03016
]
NsoK4_04960
03029 Mitochondrial biogenesis [BR:
nip03029
]
NsoK4_04960
Enzymes [BR:
nip01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
NsoK4_04960
Amino acid related enzymes [BR:
nip01007
]
Aminoacyl-tRNA synthetase
Class I (G)
NsoK4_04960
Transfer RNA biogenesis [BR:
nip03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NsoK4_04960
Prokaryotic type
Other AARSs
NsoK4_04960
Mitochondrial biogenesis [BR:
nip03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NsoK4_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DALR_1
tRNA-synt_1d
Arg_tRNA_synt_N
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
QUC65583
LinkDB
All DBs
Position
complement(818736..820622)
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AA seq
628 aa
AA seq
DB search
MSFKSLIDEIENNLKKILEDLSQSDIPFSVEPAKPGFGDASSNVSFLLAKRLKQSPKEIA
EMLSEKYEKCQNTLVLKSEAHTSGYLNFFADWKKLSQLILSESVLPEFGEIDLGKNSTIV
VEHTSVNPNKALHIGHIRNIIIGDTVSRILDKSHYHVNVLNYIDDSGLQVADIIVGFRHF
GFDQDPPNDKKFDHYCGDDVYVKTTEKYETDPSLEEIRKNTLKELEEGDSDTAKFADVIT
RRVLSAQLETCWNLGISYDCLNFESQIIRSGLWSKIFEKLKEMGMIEFEKEGKNSGCWVI
RGEGKEEDKVIVRSNGTATYIAKDIPYAAWKLGLVDDPFNYEKYEKNQPSGRQLWQTTLN
SSTEPKQNFSGQKVITVIDSRQARLQKIITSLMAKFKSVDDAYVHLGYESVTLSADTAKT
LGLETDGKQAQMSGRKGLYVNADSVYELLKNKTIEETKKRHPEMSNEDIEKIAHQVSVGT
LRYEMIKQDLDKIIAFDLTKSLSLEGDTAPYIQYTHARSARIIEKSGRTPSIDVDYGLLN
EKSELDLIRGIGLFDIQVRDAAKNLSPKVIARYCHDLAVSFNSFYEHVHVLDLGDEKLED
SRLCLVNAFKSAIEKSLDLLGISAPDKM
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttaaatctcttattgatgaaattgaaaataatctaaagaaaatactagaggat
ctgtctcaatcagacattcctttttctgtggagcctgcaaaacctggttttggcgatgcc
agttctaatgtttcttttttacttgcaaaacgactcaaacaaagccctaaggaaattgca
gaaatgttgtctgaaaaatacgaaaaatgccaaaacacacttgttttaaaatcagaagca
catacgtctggatatcttaacttttttgcagactggaaaaaactcagccaactgatttta
tctgaatctgtcttgcccgaatttggtgaaattgatcttggaaaaaattctacaattgtt
gtagaacacaccagtgtaaatccaaacaaagctctgcatattggccatattcgaaatatc
attattggtgacactgtgtctagaattttagacaaatctcattaccatgtaaatgttcta
aattacattgatgattctggattacaagttgctgatattatagttggctttagacacttt
ggatttgatcaagatcctccaaatgataaaaaatttgatcattattgtggtgatgatgtt
tatgttaaaactactgaaaaatacgaaacagatcctagtttggaagaaataagaaaaaat
actctaaaagaacttgaagagggtgactctgatactgcaaagtttgctgatgtgattaca
agacgtgtattgtccgcacaactagaaacctgctggaacctaggaatctcttatgattgc
ttgaactttgaatctcaaattattcgttctggattatggagtaaaatctttgaaaaactc
aaagaaatgggaatgatcgaatttgaaaaagaggggaaaaattctggttgttgggtgatt
agaggagagggaaaagaagaagataaagtaattgtgcgcagtaatggtactgctacatac
attgcaaaagacattccctatgctgcatggaaacttggtcttgtagatgatccatttaat
tatgaaaaatatgaaaaaaaccaaccctctggaagacagttgtggcaaactacgttgaat
tcctctacagagccaaaacagaatttttcaggacagaaagttatcactgtaattgattct
agacaagcgcggttacaaaaaatcatcacctcgttgatggccaaattcaaatctgttgat
gatgcatatgttcatcttggatacgaatctgtaactcttagtgcagatactgcaaaaact
ttgggattggaaactgatggaaaacaagctcaaatgtctggccgaaaaggcttgtatgta
aatgcagattctgtttatgaattattgaaaaacaaaacaattgaggaaacaaaaaagaga
catccggaaatgtctaatgaagacatagaaaaaatcgcccaccaggtttctgttggaacg
cttcgctatgaaatgataaaacaagatcttgataaaattattgcatttgatttgaccaaa
tctcttagtttggaaggtgatactgctccatacatacagtatacccatgcaagatctgca
agaattattgagaaatctggaagaactccttccattgatgttgattatggtttgctgaat
gaaaaatcagaactggatttgattaggggaattggtttgtttgatatccaagttcgtgat
gctgcaaagaacctttctccaaaagtgattgcaagatattgtcatgatttggcagtgtca
ttcaattcattttatgaacatgtgcatgttttggatttgggtgatgagaaattagaagat
tctagattgtgtctggttaatgcattcaaatctgcaattgaaaaatcacttgacttgcta
ggtatttctgcacctgataagatgtaa
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