Nitrosopumilus sp. K4: NsoK4_05395
Help
Entry
NsoK4_05395 CDS
T07707
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
nip
Nitrosopumilus sp. K4
Brite
KEGG Orthology (KO) [BR:
nip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nip03016
]
NsoK4_05395
Enzymes [BR:
nip01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
NsoK4_05395
Transfer RNA biogenesis [BR:
nip03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
NsoK4_05395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
ELP3_N
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-ProteinID:
QUC63899
LinkDB
All DBs
Position
898865..900445
Genome browser
AA seq
526 aa
AA seq
DB search
MSKLDSVLSKACTEITQNLLTINDPTKKQVKEEIKKICAKYSLERIPRNHEILSVVNEKD
FMKLRKVLLKKPMKTASGVSVVALMPKPFACPHGRCTYCPGGIEFNSPNSYTGNEPSTIN
AIENNYDPKLQITSKIEKLIAFGHDPSKMEIVIVGGTFLFMPKDYQENFIKSCYDALNGV
DSKSLEEAKSNNEHAKIRNVGFTIETKPDYCKQKHVDDMLNYGITRIEIGVQSLQERVYD
IVNRGHNYNDVTESFQIAKDAGYKIVAHMMPGLPTVTPEEDISDFKKLFTDSNLKPDMLK
IYPSLVIENTPMYDEYKKGEYTPYSNDEMIRVLTEVKKNVPKWVRIMRVQREISPNEIIA
GPKSGNLRQIVHENLKKQGLSCRCIRCREAGLSNKKSQESNLKLNRIDYESSGGKEVFLS
FEDENESIYGFLRLRKPSSIAHRDEVKNNCIVREIHVYGKSLKIGQKEENEIQHSGLGKH
LMKEAENISKKEFDAKKLLVISAVGTREYYQKLGYSLYGPYMAKSL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaactagattctgtattatcaaaagcatgcacggaaattacacagaatttactt
acaataaatgatccaacaaaaaaacaagtcaaagaagaaataaaaaaaatatgtgcaaaa
tattcacttgagagaattccaagaaatcatgaaattctttcagttgtgaatgaaaaagac
tttatgaaattgagaaaagtgctcttgaaaaaaccaatgaaaacagcatcaggagtttca
gtggtagcattgatgccaaaaccatttgcatgtccacatggcagatgcacatattgccca
ggagggatagagtttaactcaccaaacagctatactggaaacgaaccatctacaattaac
gctattgaaaacaactacgatcctaaattacaaatcacatccaaaattgaaaaactaatt
gcgtttggacatgatccatctaaaatggaaattgtgattgttggagggacatttcttttc
atgccaaaagattatcaagaaaattttatcaaatcatgttatgacgcattaaatggagtt
gattcaaagtcgctagaagaagcaaaatcaaataacgaacatgcaaaaattcgaaacgta
ggattcactatagaaacaaaaccagactattgtaaacaaaagcatgttgatgatatgttg
aattatggcattacaagaatagaaataggagtgcaatcactacaagaaagagtttatgac
attgtaaacagaggtcacaactacaatgacgtaacagaatcatttcaaattgcaaaagac
gctggatacaaaattgttgcacacatgatgccaggattgccaacagtgacaccagaagaa
gacatttctgatttcaagaaattattcacagattcaaatctgaaaccagatatgctgaaa
atatatccatcattagtaattgaaaacactccaatgtatgatgaatacaaaaaaggagaa
tacactccatactcaaatgatgaaatgattagagttctaaccgaagtaaagaaaaacgtt
ccaaagtgggtacgtattatgagagtgcaaagggagatatccccaaatgaaatcattgca
ggcccaaaatcagggaatttaaggcaaattgttcatgaaaacctcaaaaaacaaggcttg
tcatgcagatgtattagatgtagagaagcaggattatcaaataaaaaatctcaagaatca
aatcttaaactaaacagaattgattacgaatcatcaggagggaaagaagtattcctgtca
tttgaagatgaaaatgagtcaatctatggatttttgagattaagaaaacccagcagcata
gcacacagggacgaagtgaaaaacaattgcattgttcgtgaaattcatgtttatggaaaa
tccctaaagattggacaaaaagaagaaaatgaaatacaacattcaggacttggtaaacac
ctaatgaaagaagctgaaaatatttcaaaaaaggagtttgacgcaaaaaagcttctcgta
attagtgcagtaggaacaagagagtattatcaaaaattagggtattcgttatatgggcca
tacatggcaaaatcattgtaa
DBGET
integrated database retrieval system
