Nymphalis io (European peacock): 126768380
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Entry
126768380 CDS
T08495
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03020
RNA polymerase
niq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126768380
09124 Replication and repair
03420 Nucleotide excision repair
126768380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niq03021
]
126768380
03400 DNA repair and recombination proteins [BR:
niq03400
]
126768380
Enzymes [BR:
niq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126768380
Transcription machinery [BR:
niq03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126768380
DNA repair and recombination proteins [BR:
niq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126768380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
126768380
NCBI-ProteinID:
XP_050342365
LinkDB
All DBs
Position
1:8089793..8099198
Genome browser
AA seq
1889 aa
AA seq
DB search
MATTNDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGIRFPETMEGGRPKLGGLMDPRQGV
IDRSSRCQTCAGNMTECPGHFGHIDLSKPVFHIGFITKTIKVLRCVCFYCSKLLVSPTNP
KIKEVVMKSKGQPRKRLTYVYDLCKGKNICEGGEDMDIGKEGEEGKRGSGHGGCGHYQPS
IRRQGLDLTAEWKHANEDTQDKKIIITAERVYEILKHITDEESFILGMDPKFARPDWMIV
TVLPVPPLAVRPAVVMFGSAKNQDDLTHKLADIIKANNELMRNEQSGAAAHVLTDNIRML
QFHVATFVDNDMPGMPKAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITPD
PNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNAQYPGAKYIVRDNGERIDLR
FHPKSSDLHLQYGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTS
PYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTK
RDVFLTKEQVMNLLMFLPTWDGKIPQPCILKPQPLWTGKQIFTLIIPGNVNMVRTHSTHP
DEEDDGPYNWISPGDTKVVVEHGELLKGILCKKSLGASAGSLLHICMLELGHETAGRFYG
NIQTVINNWLLLEGHSIGIGDTIADPQTYQEIQRAIVKAKDDVIEVIQKAHNMELEPTPG
NTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVAGSKGSNINISQVIACVGQ
QNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDT
AVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLAGETVEFQNLPTVK
LSNKAFEKKFKFDPTNERYLKRIFNEDIIKELTESGYVIADLESEWEQLCKDREVLRQIF
PSGESKVVLPCNFKRMIWNVQKIFHINKRLQTDLSPIKVIQGVKDLLNKCVIVAGDDRLS
KQANENATLLFQCLVRSTLCTKFVSEDYRLSSEAFEWLIGEIETRFQQAQVNPGEMVGAL
AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAARD
AEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKISPW
LLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNNEESKFQ
DNDEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIAKVYMHLPQTEAKKRIIITEQGEFK
AIAEWLLETDGTSLMKVLSERDVDPIRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQFY
GLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAEVD
PMRGVSENIIMGQLPRMGTGCFDLLLDAEKCKHGMEMGGLGVGMGVGGGIYFGVGTPSMT
PLMTPWSNQNTPGYGASVWSPGQVGSSMTPGPSFSPSGASDASGLSPAYSSSWSPQPGSP
GSPGAPLSPYASPAGASPSYSPTSPVYAAPSPSLTPTSPHYSPASPSYSPTSPNYSPTSI
YSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPAYSPTSPSYSATSPSYSPT
YSPTSPSYSPTSVAYSPTSPGYSSSPNYSPTSPAYSQGSHNYSPSSPNYTPTPAPYSPTT
PNYSLTSAYSPASQSYSPSTLKYSPSPNYSPTSPSLAGSPSSPQYLPKSPQYSPSSTAYS
PSSPQHPGSTQYSPSSSNYSPSSPNYSSTSPGYSPSSTKYSPTSPTYTSTSTNYSPTSLA
YSPSSAGPSYSPTTPNYSATSPTHDDDDD
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgaacgattctaaggcgcctttgcgccaagttaaaagagtacaatttggt
atattatccccagatgagatccgacgaatgtcagtcacagagggaggcattcgctttcca
gaaactatggaaggtggaaggcccaagcttggtgggcttatggaccctcgacaaggggta
attgacagaagttccaggtgtcagacttgtgcaggaaatatgacagaatgtccaggacac
tttggacacatagatttatcaaaaccagtttttcacattggttttataacaaaaacaata
aaagttttaagatgtgtttgtttttattgttcaaagctgttagtcagtccgacaaatcct
aagattaaagaagtggttatgaaatcaaaaggacagccacgtaaaagattgacatatgtg
tatgatttatgtaagggtaaaaatatatgtgaggggggagaagatatggatattggaaaa
gaaggtgaagaaggcaaaaggggatccggccatggaggttgcggtcactatcagccatct
attagacgacaaggcttagatctgactgcagagtggaaacatgctaatgaagatacacaa
gataagaaaattattataacagcagaaagagtttatgaaattttgaaacatataacagat
gaagagtcattcatcttaggtatggaccctaagtttgctcgacctgactggatgattgta
acagttcttccagttccacctttagctgtaagacccgctgtggtaatgtttggatcggca
aaaaaccaggatgatttgacccacaaacttgcagatattatcaaagcaaacaatgagtta
atgagaaatgaacaatcaggggcagctgctcatgttctaacagataatataagaatgtta
caatttcatgtggcaacatttgtagataatgacatgcctggaatgccaaaagccatgcaa
aagtcaggaaaaccacttaaagcaattaaagcacgtttaaaaggtaaagaaggaagaatt
agaggaaatcttatgggaaagcgtgtcgacttctctgctaggactgtgatcacaccagat
cctaacttgcgtatcgatcaagtgggagttccgagatccattgctcaaaacttaactttc
ccagaattagtgacaccttttaacatagataggatgcaagagttagttagacgtggtaat
gcacaatatccaggagctaaatacatcgtacgggataatggagaaagaatagatttgcga
ttccaccctaaatcctcagatttacatttacaatatggatataaagtagaacgtcattta
agagatgatgatttggttattttcaatcggcaaccaacattacacaagatgagtatgatg
ggtcatagggttaaagtattaccatggtcaacatttcggatgaacttgagttgcacttca
ccatacaatgctgattttgatggagatgaaatgaatttacacgtcccacaatctatggaa
actcgtgcagaggtagagaatatacatataaccccaagacagattattactccacaagca
aacaaacctgttatgggtattgtacaggacacattaactgcagtaagaaaaatgacgaaa
agagatgtgtttttgactaaagaacaagttatgaatctacttatgttcttgccaacctgg
gatggtaaaataccacaaccgtgtatcttaaaaccacaaccactttggactggaaagcaa
atatttacactgattattcctggaaatgtaaacatggttcgaactcattccacacatcct
gatgaagaagatgacggtccatacaattggatttcaccaggagatacaaaagttgtagtg
gaacatggagagttgctaaagggaattctatgtaaaaaatcgttgggtgcatcagcgggt
tccttgcttcacatttgcatgttagaactgggccatgaaactgctggacgtttttatgga
aatattcaaactgtgattaataattggcttttattggaaggtcactccattggtattggt
gacaccattgctgatccacaaacataccaagaaattcagcgggctattgttaaagctaaa
gatgatgtcatagaggttattcaaaaggcacacaatatggagctagagccaactcccggt
aatacgcttaggcaaacattcgagaaccaagtaaatcgtatcttaaacgacgctcgtgac
aaaactggaggttctgctaagaagtctctaacagaatataacaatcttaaagccatggtg
gtggcaggttccaaaggttcaaatattaatatttctcaggttattgcttgtgtgggtcaa
caaaacgtagagggaaagcgtattccatttggtttccggaaaagaacattgcctcatttt
attaaagacgattatggtcctgaatcgagaggttttgttgaaaattcctatcttgctggt
ttaacgccttctgaattctatttccatgctatgggtggtcgtgaaggtcttatcgatacg
gcggtaaaaacagcagaaacaggatatattcaacgacgtctaataaaggccatggaatcg
gtcatggtacactatgatggcaccgtccgtaactctgtgggacagttgattcaattgaga
tatggtgaagatggattagcaggagaaacagtagaatttcaaaatctaccaacagtgaaa
ttgtctaataaggcatttgaaaagaaatttaaatttgacccaacaaatgaaagatatttg
aaaagaattttcaatgaagatataataaaagaattgacagaatcaggctatgtcattgct
gatcttgaaagtgaatgggagcagttgtgtaaagatagagaagtacttcgtcaaattttc
cccagtggagaatcaaaagtagtattgccttgcaatttcaagagaatgatctggaatgta
caaaaaattttccatattaataaaagattgcaaactgatctgagtccaatcaaagttata
caaggtgttaaggatcttttaaataaatgtgttatagttgctggtgacgatcgattgtct
aaacaagccaatgaaaatgcaactctacttttccaatgtttagtcagatctacactgtgt
acaaagtttgtttctgaagattacagactgtctagcgaagcctttgaatggttaattgga
gaaatagaaacacgttttcaacaggcccaagttaacccaggtgaaatggttggagcttta
gctgctcaatcacttggggagcctgctactcagatgacattgaatactttccactttgct
ggtgtgtcatccaaaaacgtgacacttggtgttcctcgactaaaggaaattattaacatt
tcaaagaaaccaaaagctccctcactaactgtttttcttactggaggtgcagctagagat
gctgaaaaagctaaaaacgtcttatgtcgattggaacatactactttacgcaaagttact
gcaaacacggctatttattacgatcccgatccacaaaatactgttattgctgaagatcaa
gaatttgttaatgtctactacgaaatgcctgactttgatcctacgaagatttctccatgg
ctcttacgtatcgaattagatcgtaaaagaatgacagacaagaaattgactatggaacaa
attgcagaaaagataaatgcaggatttggagatgacttaaattgcatcttcaatgacgat
aatgcagagaaattagtattacgtattagaattatgaataatgaggagagtaaatttcaa
gataatgacgaagaaactgttgacaagatggaagatgatatgttccttagatgtattgaa
gctaacatgttatctgatatgacattgcaaggtatagaagctatagcaaaagtgtacatg
cacttaccacaaacagaagccaaaaaacgtattattattactgagcaaggtgaattcaaa
gctattgcagagtggttgttagaaactgatggtacttccttaatgaaagtgctttccgaa
cgtgacgtggatccaataagaacgttcagtaacgacatatgcgaaatattccaagtgtta
ggtattgaagctgtacgtaagtctgttgaaaaggaaatgaatgctgtattacagttctac
ggtttatacgtaaactatcggcaccttgctttactttgtgacgtgatgactgctaaaggt
catcttatggctattacgcgacacggtatcaatagacaagataccggagctctcatgaga
tgctcattcgaggaaacggtagacgtgttacttgacgctgcaagtcacgctgaggttgat
cccatgagaggtgtatctgaaaacataattatgggtcagttacccaggatggggactggc
tgcttcgacttattacttgatgctgaaaaatgcaaacatggaatggaaatgggtgggctt
ggtgtcggcatgggggttggaggtggaatatacttcggagttggaactccatctatgacc
ccgttaatgaccccttggtccaatcaaaatactcctggatatggtgcctcagtttggtcc
cctggccaagtcggcagcagtatgacgcctgggccatcattttcgccgtcaggtgcatcg
gacgcatcaggattgtcaccagcttacagcagttcatggtcaccacaacccggatcacct
ggttctcctggcgctcctttgtctccctacgcatcaccggcaggtgcatctccgtcttat
tcaccaactagtccagtttatgcggctccgtcgcccagccttactcctacatcccctcat
tattcacccgccagtccgtcctattcaccaacatctccaaattattcaccgacttctatt
tattcgccaacttcaccaagttattcacctacttcaccaggttactctcctacgtccccg
tcgtattccccgacatcgcctaggtattcgccaacatcgccaagttattctccaaccagc
ccagcatattccccaacatctccaagttattcagccacttctcctagctattcgcctacc
tattcaccaacgagcccatcatattcaccaacaagtgtggcatactctccaacatctccg
ggatattcttcatcacctaattattctccgacaagtccagcttacagtcaaggctctcat
aattattccccatcatcaccaaattatacaccaacacctgctccatattcacctacaact
cccaattattccctaacctcagcttactctccagcctctcagagttactcgccatcaaca
ctcaagtactcaccgtctccaaactattcacctacctcgccatcacttgcaggtagtcca
agcagtccacagtatttaccaaaaagtccacagtactcaccttccagcacagcgtattct
ccttcatccccccaacatcctggtagtacacaatattcaccttcctcatcgaactattct
ccatcgtcaccaaattactcctctacatcaccaggctattcgccttcttctactaaatat
tctccgacatcacctacatacacgtctacatctacaaattattcacccacgtcactagcc
tattcgccatcttcggctggcccatcatactctcctacaacaccaaattattccgcgacg
tcaccaacacatgatgatgatgatgattaa
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integrated database retrieval system
