Nymphalis io (European peacock): 126769440
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Entry
126769440 CDS
T08495
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126769440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niq03021
]
126769440
03019 Messenger RNA biogenesis [BR:
niq03019
]
126769440
Transcription machinery [BR:
niq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126769440
Messenger RNA biogenesis [BR:
niq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126769440
U7-dependent histone pre-mRNA processing factors
126769440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
AAA_lid_10
Motif
Other DBs
NCBI-GeneID:
126769440
NCBI-ProteinID:
XP_050344199
EnsemblRapid:
ENSIIOG00005010981
LinkDB
All DBs
Position
7:10646109..10656138
Genome browser
AA seq
1094 aa
AA seq
DB search
MSSKYQPGSNVTPQTQLVQWINEAGMAEGTKKANLVRKIVEVLLHQAPQMVPVYMENILS
LVNDKSTDVKRQVVAFIEELSKAFPHLLPKIIGQLQLLVIDSVIAVQKRAIQAASIVYRN
VLIWICKESAEVSEMQYVWEHLTELKLLILNMIDSDNEGIRTHSIKFLEEVVLLQSSNPS
DDSDEDFRLENLPTHLAFLKRNAMEEESDHIFQLLLKFHNSQHISSVNLMACMTTLCLVA
KLRPKYLSSVVQALGDLHTTLPPTLSQSQVNSVRKHLKMQILILVKHPSSGEMMPQLMQL
LSDIGMTPQEINKAVPKEKRNKRLGEIKNGDTPAKRLRVDSPQSTVGSDSNSNSRSDFII
FDEDNTQPMITKATATEDSIFEGLNSVDNVVNLVMSTLSNNLPSEITSHFLSTYKPIPNS
GTKVQKRALAKMLLALIRDEAPAPVMPPLLSDFGTKIPLLREDDDKVTLKNAVAKLQEST
KDKQIENALSKLMEETRQEHLKEEERKAKDKEKLVPPPTPTVPKLKQKVKLLKLQEITRP
IPKEIKSKLMLQAVDRILRAEKESAIGGAAQIRAKFITIFASSYTSDIRELVLNYILEDP
LNRMDLALSWLYEEYAYMQGFNRHPVTLQPKTHEKPDENYNQLLCALITQISERGDPIME
ASKDILLRKVYMEAPVITDEAVDYLKHLISENKSSNLGLELLEELCIMRPPRSHKYVAAL
VCNVLSENEEIRDLTLKSCVKIYKQCTEAAKKVIEKNALLYLGFISLSTPPQELFGNRYT
NRPWTDELFKMCLNLVMALFPENEELIMEIARVYGCAGAEAKRCVLRALEAPLRAALQPA
ALRPAFAALLHDCPRGAETLLTRLVHILTDKAAPSAELVRRVRELYATRVSDVRFLIPVL
NGLSKKEILAALPKLIKLNPAVVKEVFNKLLGLQNPNNEQLPVSPEDLLVALHLIDPNKA
DLKYIIKATALCFAEKNIYTQDVLSAVLQRLAEETEIPVLMMRTVLQALTLYPNLSALAI
NILQLLIEREVWNNKVAWEGWLKCAERLGPRAAPALGALPPRAAAALPPHVAALRPQEKP
YKPKPNEPLPPGMD
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaaatatcaaccagggtcgaatgtcactcctcaaacacagttggtacaatgg
ataaacgaagctgggatggcagagggcacgaaaaaagccaatcttgtaagaaagatagtg
gaggttttgttgcaccaagctccacaaatggtgcctgtttatatggaaaacattttaagc
ttagttaatgataaatcaactgacgtaaagagacaggttgttgcctttattgaggagttg
agtaaagcattccctcacctcctacccaagataattggtcaactccaattactagttatt
gactctgtgatagcagtacagaagagagctatccaggcagcgagcattgtctatagaaat
gttttaatatggatttgcaaagaaagtgctgaggtttctgagatgcagtatgtgtgggaa
cacctcacggaattaaagttacttattttgaatatgatagacagtgacaacgaaggaatc
agaactcactcgatcaagttcctcgaagaagtggttctcctccagagctcaaatcctagc
gatgattccgatgaagattttagactggaaaatttacctacacacttggctttcttgaaa
aggaatgcaatggaagaggaatcggatcacatatttcaactgctcctcaagtttcataac
tcacaacacatttcaagtgtgaatctaatggcttgtatgacaacgctatgcttagtcgcg
aagttaagacctaaatatctatcaagtgtagtccaagctttaggcgacctgcacacaacc
ttaccgccgacattgtcacaatcgcaagtgaattcagtacggaaacatttgaagatgcaa
attttaatactggtcaaacatccatcttcgggcgaaatgatgccccaactgatgcagctg
ctgtcagacatcggaatgacaccccaagaaataaacaaggctgtacctaaagaaaagagg
aataaacggttgggtgagattaagaatggggatacaccagccaagcggctaagagtcgat
tccccccaaagcactgttggtagtgatagtaacagcaacagtcgaagcgatttcatcatt
tttgatgaagataatactcagccgatgatcactaaagcaacagcaactgaagactctata
ttcgaaggtctgaacagcgtagataatgtcgtcaatctcgttatgtcgacattaagtaat
aatttaccgagcgaaattacgagtcattttctctccacatacaaacccataccgaattca
ggtactaaagtccaaaaacgtgcattggcgaaaatgttactggccctaataagggacgaa
gctccagccccagtaatgccgcctctattatcggatttcggaactaaaattccactattg
agagaagacgacgataaagtaactcttaagaacgcagtagcgaaacttcaggaatcaacg
aaagataaacaaatagaaaacgctttgtctaaattgatggaggaaacgagacaggaacat
ttgaaggaagaggagagaaaagctaaggataaagaaaagttagtgcctccaccgacaccg
accgttccgaaacttaagcaaaaagtcaagctattgaaactgcaagaaataacacgacca
atacctaaggaaataaagagtaaattaatgttacaagccgtcgatagaattctaagagcg
gagaaagaaagcgctataggcggagctgctcagatacgtgcgaagttcattacgatattc
gcatcaagttacacttcagatatcagggaattagtgcttaattatatactcgaagatcct
ttgaacagaatggatttagcgttgtcgtggctgtacgaagagtatgcgtacatgcaaggt
ttcaaccggcacccggtgacgctacagccaaaaactcatgagaaacctgacgaaaattat
aaccagctgctctgtgccttaatcactcaaatatcagagaggggggatcctataatggag
gcaagcaaagatatccttctacggaaggtgtatatggaagctccggtgatcacggacgaa
gcggttgattatttaaaacatttaatctcagaaaataaatcgtcgaacttaggattagag
ttattggaggaactgtgcataatgcggccgccgaggtcgcacaaatacgtcgcggcgctg
gtgtgtaacgtactgagtgaaaacgaagaaatacgagacctaacgttaaaatcctgtgtg
aaaatatacaaacaatgtacggaggcagcaaagaaagtgatcgagaaaaatgcccttctg
tacctcgggttcatatctctctcgactcccccgcaagagttgttcggcaacagatacacg
aatagaccctggacggacgagctgttcaagatgtgtctcaatcttgtgatggccttgttt
ccagaaaatgaagagctgataatggagatagcgcgcgtgtacggctgcgcgggcgcggag
gccaagcgctgcgtgctgcgcgcgctggaggccccgctgcgcgccgcgctgcagcccgcc
gcgctgcgccccgccttcgccgcgctgctgcacgactgcccgcgcggcgcggagacgctg
ctcacgcgcctcgtgcacatcctcaccgacaaggcggcgccgagcgcggagctggtgcgg
cgcgtgcgcgagctgtacgccacgcgcgtgtccgacgtgcgcttcctcatccccgtgctc
aacggactgtccaagaaggagattttagctgctctaccgaaattgataaagttaaatcca
gctgtcgtgaaagaggttttcaacaagctgctcggattgcagaaccccaataatgaacaa
ctgccggtgtccccggaggaccttctggtggctttgcacttaatcgacccgaataaggcc
gatctcaagtacattatcaaggcgactgcactttgtttcgccgaaaagaacatctacaca
caggacgtattatcagcagtgcttcagcggctggccgaggagactgagatccctgtgctg
atgatgcggacggtgctgcaggcactcacactgtatccaaatctaagcgctcttgcgatt
aacattctgcaattacttatagagagagaggtgtggaacaacaaagtggcgtgggagggc
tggctgaagtgcgcagagcgcctgggcccgcgcgcggcgcccgcgctgggcgcgctgccg
ccgcgcgccgccgccgcgctgccgccgcacgtcgccgcgctgcgcccgcaggaaaagccg
tacaagccaaaaccaaatgagccattgccaccgggcatggattga
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