KEGG   Nymphalis io (European peacock): 126769966
Entry
126769966         CDS       T08495                                 
Name
(RefSeq) cullin-4A isoform X1
  KO
K10609  cullin 4
Organism
niq  Nymphalis io (European peacock)
Pathway
niq03420  Nucleotide excision repair
niq04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:niq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    126769966
  09124 Replication and repair
   03420 Nucleotide excision repair
    126769966
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:niq04121]
    126769966
   03400 DNA repair and recombination proteins [BR:niq03400]
    126769966
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:niq04147]
    126769966
Ubiquitin system [BR:niq04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     126769966
DNA repair and recombination proteins [BR:niq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      126769966
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      126769966
Exosome [BR:niq04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   126769966
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 SecA_SW Cas_Cas5d
Other DBs
NCBI-GeneID: 126769966
NCBI-ProteinID: XP_050344981
LinkDB
Position
1:12847925..12855275
AA seq 794 aa
MSGVSKTSVLVEEGGNQFRKRSHISSNNDQCTKRTKFDDMSANEKKSNFSMLNPNTNGTI
KMTSSSMNKPGAATKKLVIKNFKSKPNLPENYQETTWSKLREAVIAIQTSKAIAYSLEEL
YQAVENMCSHKMASQLYVNLTNLVEAHVKSNIEQFLSESMDRQVFLKRMDDCWRAHCRQM
IMIRSIFLYLDRTYVLQNPSIHSIWDMGLDLFRHHIAMNTLIQTRTVDGLLLLIERERGG
DAVDISLLKSLLRMLSDLQIYQDAFEHKFLQATERLYAAEGQRLMRELAVPQYLAHVEKR
LREENERLLHYLDPCTKWQLIHTIERQLLSEHLTGILSKGLESLMDGPRLHDLTTLYNLF
SRVKELGLSELCSHFNAYIKKKGRTIVIEPERDKTMVAELLEFKEQLDNVVSTCFQRNDR
FLYSMREAFEYFINQRQNKPAELIAKFVDLKLRAGNKEATEEELERLLDKIMVLFRFIHG
KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN
ITYKQHLAASQEGVGLELSVYILTMGFWPTYPPVEVRLPVELTRHQDHFAKFYLAKHSGR
KLQWQATLGHCVLRAHFSQGNKELQVSLFQALVLLLFNDGDNLSFEEIKTATNIEEGELR
RTLQSLACGKARVLLKAPRGRDVQDDDHFSFHADFTNKLFRIKINQIQMKETSEEQKATE
ERVFQDRQYQIDAAIVRVMKMRKALSHNLLISELYNQLKFPVKPADLKKRIESLIDRDYM
ERDKDNPNQYNYVA
NT seq 2385 nt   +upstreamnt  +downstreamnt
atgtcgggcgtatctaaaacatctgttttggtcgaggagggtggtaatcagtttagaaaa
cgttctcatataagttctaacaacgatcagtgcaccaaaagaacaaaatttgacgatatg
agtgcaaatgaaaaaaaatcaaacttctcaatgttgaatcccaataccaacggtactata
aaaatgacatcttcatcgatgaacaagccaggagctgcgacaaagaaactagttataaag
aactttaaaagtaaaccgaatcttccagaaaattaccaggagacaacatggagcaaactt
cgggaggccgttatagctatacaaacctcaaaggcaatagcctattccttagaagaatta
tatcaagcagttgaaaatatgtgcagccataagatggcgtcacagttgtacgtgaatctg
acgaacctagtggaggcgcatgtaaagtccaatattgagcagttcctctctgaaagtatg
gacagacaagtgttcctcaaacgcatggatgattgctggcgagcacactgccgccaaatg
ataatgatccgtagcatctttctatacttagaccgtacctatgtgttacagaatcctagc
atacattctatatgggatatgggtctcgacctttttcgacaccacatagcaatgaacaca
ctaatacagacgcgcacggtggatggccttctgttgctgatagaacgagagcgcggtggt
gatgccgttgacatctcactgctcaagagcttgctacgaatgctgtctgacttacagata
tatcaagatgcatttgaacacaaattcctacaagcaacagaacgcttgtacgcagctgag
ggtcaacgattaatgagagaattggctgttcctcaatatttagctcatgttgagaaaaga
cttagggaagaaaatgaacggctattgcattacctagatccctgcactaaatggcaacta
attcacactatcgagcgacagctgttgagcgagcacctgacgggtatcctcagcaaaggt
cttgaatccctaatggacggtccacggctccatgacctcacaacactctacaacctgttc
agtcgtgttaaggaacttggacttagtgaactgtgcagccatttcaatgcctacatcaag
aaaaaaggacgtactatagtaattgagccggaacgtgataagactatggtagccgaacta
ttggagtttaaggaacaactggacaatgtcgtaagcacctgtttccaaaggaacgaccga
ttcctttactctatgagggaagcgtttgagtacttcattaatcaacgacaaaacaaacct
gcagaactaattgctaaatttgttgacttaaagctcagagctggtaacaaagaagccaca
gaggaagaattagaaaggctattagacaagatcatggttctgttccgtttcatacacggg
aaggatgtctttgaagcattttataagaaagatttagcgaaacgattgcttgtgggcaaa
tctgcctctgtagatgctgagaagtcaatgcttagtaaattgaaacaggaatgtggtggg
ggtttcacctgtaaattagaaggcatgttcaaggatatggaactgtctaaagatattaat
attacttataaacagcacttggcggcgagtcaggaaggagtcgggctggagctgtcggtg
tacatcctgacgatgggcttctggccgacctacccgcccgtggaggtgcgtctgccggtt
gagctgacgcggcaccaggaccacttcgccaagttctacctcgccaaacactccggccgc
aagctgcagtggcaagccacgctgggacactgtgtgctcagggctcacttctcgcagggt
aacaaagagctacaggtttcattatttcaagctctcgttctgctattattcaatgatgga
gataatctctcctttgaggaaattaagactgctacaaatatagaggagggcgagctgcgg
cgcacgctgcagtcgctggcgtgcgggaaggcgcgcgtgctgctcaaggcgccgcgcggg
cgggacgtgcaggacgacgaccacttctccttccacgcggacttcaccaacaagctgttc
cgcatcaagatcaatcagatacagatgaaggaaactagcgaagaacagaaggcgacggag
gagcgcgtgttccaggaccgtcagtaccaaatcgatgcagccatcgtgcgcgttatgaaa
atgcgtaaagcgctgtcgcataacctgctcatttctgagctctataaccagctcaagttc
cccgttaagccggcagaccttaaaaagcgtatagaatccctgatcgacagagactacatg
gaacgcgacaaagacaaccccaaccagtacaactatgtcgcgtag

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