Nymphalis io (European peacock): 126770494
Help
Entry
126770494 CDS
T08495
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
niq
Nymphalis io (European peacock)
Pathway
niq04140
Autophagy - animal
niq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126770494
04148 Efferocytosis
126770494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
niq04131
]
126770494
Membrane trafficking [BR:
niq04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
126770494
Hops complex
126770494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
DUF4562
Clathrin
zf-RING_11
zf-RING_16
Beta-prop_Nup120_160
zf-C3HC4_2
zf-C3HC4
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
126770494
NCBI-ProteinID:
XP_050345852
LinkDB
All DBs
Position
9:complement(13080347..13087112)
Genome browser
AA seq
986 aa
AA seq
DB search
MTSIFDQYEQASQVSQRSVPASEQMTSSGYINMQLNDNTPMFSKQKMNFNPSDLITHVAV
SSDFLVLAMANGKLFRLDLKMPDQHEEIHYTKFVQPNSKLTSIFLDPLGYHLLMAFAARN
KDGNPELVYLHRKSSKLKSVAKSRNYEVTEVGWNYENRSTVTTGPILLGTSQGHILETEL
EADTDRMFTASQQYWRQLPNYMPLYGGREIDGLIFDIGKGTDTPITGIQFHRVTNTSKYF
IFVTTPKRLYQFIGHAIITDDKPSLQSIFHSYLTTPETGFQEIPSTLKYSKLQFYFDKTN
TPKTFAWLTEPGIFYGQLDPTSQQNSNSLFTQSELINYPSDANSKETIPISFVLTEFHAI
LMYSDRVKAVSLLNQELVYEDKYSEVHGKLKNIVKDPIRRTIWAVTGNAVFRYKVSREER
NVWRIYSDKEQFDLAKQYCQNNPAFIDIINVKQAELLFGKGDYDKSAEIYAETQSSFETV
CLKFLEVEQVNALKVYLGKRLDALEDDKTLISMIVIWMAELYLSQLGTFRRMGKGDSREY
HQIQSDFEVFLLQPKVVKCMQHIKSVVYDLMSSHGDKQNLIKLTVINEDYENVVAQNIYK
KSYIEALNMLLSLKKSDLFYQFAPALMEEVPKQTVNALIDQGPLLSPSKLLPAFLSCEND
KAHVTEIIRYLEFMLQNFNVKDRAIHNYLLTLYVEHDHLALMRYLARQGQELSMVNYDVH
YALRLCREKGLSEACVKLSALLGLWESAAELALGVDVALAKSLADLPDDAALQRRLWLGI
AEHVITKNQDIKEAMTLLEECPLIKIEDILPFFSDVVTIDHFREPICQSLQEYNNQIEEL
KAEMEDATKSAEYVRNEIQSFRNRSVLVSVGDACCLCDIALLLRPFYLFPCAHRFHSDCL
LAEMSPLLAPARRNKLTDLQRQLAVLSNIELSTVTSTGLPLREVLKNEIDDIVASECVFC
GEHMIASIDKPFIADEDWDRVMKEWE
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgatttttgatcaatacgagcaagcatctcaggtgtcccaacgctctgttcct
gcatcagaacaaatgacatcttctggatatatcaacatgcagttaaatgataacacacca
atgttctctaaacagaagatgaatttcaatccctcagacttaataactcatgttgcagtg
tctagtgactttcttgtacttgctatggctaatggaaagctgtttagacttgatttaaaa
atgcctgatcagcatgaagaaatacactatacaaaatttgtgcaaccaaactcaaaacta
acctccatcttcctcgaccctcttggataccaccttctcatggcctttgctgcaaggaac
aaagatggtaacccagaactagtatacttgcatcgcaagagtagcaagcttaaatctgtt
gcaaaatctagaaactatgaagtaacggaagttggttggaattatgaaaacaggtctaca
gttacaacaggccctatactgttgggcacgtctcaagggcatatactggaaactgagtta
gaggctgatactgacagaatgtttacagctagccagcagtattggagacagctgcctaat
tatatgcctctatatggaggcagggaaatcgatggtttgatatttgatatcggtaaaggt
acagatacaccaattacaggaattcaattccatagagtaacaaatacaagcaaatacttt
atattcgtcactactccgaaaagattgtaccagtttatagggcatgcaataataacggat
gacaagccatccctccagtccatattccattcatatctgaccacaccggagactggattt
caagaaataccttccaccttgaaatattctaaacttcagttctattttgataaaacaaac
actccaaaaacatttgcatggttaacggagcctggtatattctacggtcagttggatcca
acgtcgcaacaaaactcgaactcacttttcacgcagagcgaactcattaactatccatcc
gatgcaaatagtaaagaaacgataccgatatcctttgttttaactgaatttcacgcgatt
ctcatgtactcggatagagtaaaagccgtgtctctattgaatcaagagctagtttatgaa
gacaaatattctgaagttcatggaaagttaaagaatatcgtcaaggatcctataagacgg
acgatttgggcggttaccggaaacgctgtcttcagatacaaagtcagtagagaagagagg
aatgtatggaggatttattccgataaagaacaattcgatttggctaaacagtattgccaa
aataatcccgcgttcatcgatattatcaacgtaaagcaagccgaactgctcttcgggaaa
ggcgattacgataagagcgcggaaatttacgcagaaacccaaagcagcttcgagaccgtc
tgcctaaagttcctagaagtcgaacaagtgaatgccctgaaagtttacctggggaaaaga
ttggacgccttggaagacgataaaactctcatatcgatgatcgtgatctggatggctgag
ctgtatttatcacagctgggcacatttagacgtatggggaaaggcgattcgcgagaatac
caccaaatacaaagcgactttgaagtttttctactacagccgaaggtggtgaagtgcatg
cagcatataaagtcagtcgtgtacgacctcatgtcctcccatggagacaaacagaatcta
atcaaactaactgtgatcaacgaggactacgagaacgtggtcgcccagaatatttacaag
aagtcatatatagaagcactgaatatgcttctgtctttgaaaaagtccgacttgttctat
caattcgctccggctcttatggaggaagtaccgaagcaaacggtgaacgcgttgatcgac
caaggaccgctgctgagcccctcgaaactcctaccggcttttctttcgtgcgagaacgat
aaagcccacgtgactgaaattataagatatttggaatttatgttacaaaactttaatgta
aaggatcgggcgatacataactatttactgacgctgtacgttgaacacgaccatctagct
ctaatgaggtacctggcgaggcaaggccaagagctgtcgatggtgaactacgatgttcat
tacgctttgaggctctgcagagagaaaggcctgtccgaggcctgcgtgaagctgtccgcc
ctgctcgggctgtgggagtcggcggccgagctggcgctgggagtggacgtggcgctcgcc
aagagcctcgccgacctgccggacgacgccgcgctgcagcgcaggctgtggctgggcatc
gcggaacatgtgataacgaagaatcaagacataaaggaagcgatgactctacttgaagag
tgccctcttattaaaatagaagatatactgccgttcttcagcgacgtggtcaccatcgac
cactttagagaacctatttgtcaatctctgcaggagtacaataatcaaatagaggagttg
aaggctgagatggaagatgcaacgaaatcagccgaatatgtccgcaacgagatccagtcg
ttccgcaaccgcagcgtgctggtgtcggtgggcgacgcgtgctgcctgtgcgacatcgcg
ctgctgctgcgccccttctacctgttcccgtgcgcgcaccgcttccacagcgactgcctg
ctggccgagatgtcgcccctcctggcgccggcacgccggaacaagttaaccgatctgcag
cgccagctcgcagttctgtcgaacatagagctgtccacggtcacgtcgaccgggctgcct
ctcagggaagtgctaaagaatgaaatagacgacatcgtcgccagcgagtgcgtcttctgc
ggcgaacacatgatcgctagcatcgacaaaccgttcattgcagacgaagattgggaccgg
gtcatgaaggaatgggagtga
DBGET
integrated database retrieval system
