Nymphalis io (European peacock): 126771578
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Entry
126771578 CDS
T08495
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
niq
Nymphalis io (European peacock)
Pathway
niq04140
Autophagy - animal
niq04142
Lysosome biogenesis
niq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
126771578
04140 Autophagy - animal
126771578
04148 Efferocytosis
126771578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
niq04131
]
126771578
Membrane trafficking [BR:
niq04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
126771578
Hops complex
126771578
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS18_solenoid_2nd
zf-C3HC4_2
VPS11_C
zf-RING_2
zf-C3H2C3
zf-rbx1
zf-C3HC4
zf-RING_5
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
zf-RING-like
Beta-prop_VPS8
NPF
zf_RING_Vps8_fungal
Beta-prop_pof12
Beta-prop_NOL10_N
ANAPC4_WD40
zf-RING_16
zf-ANAPC11
WD40_2
Clathrin
CadC_C
VPS18_RING_C
FYVE_2
zf-RING_UBOX
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
126771578
NCBI-ProteinID:
XP_050347489
LinkDB
All DBs
Position
11:3222517..3238713
Genome browser
AA seq
1043 aa
AA seq
DB search
MAFLEWRRFTFFDVHKNIDNGKIAECLQDTNVTVATSGNNHVILCDVTGWAHLISRSWEI
TSFKAYDLTVTLAQQLPHDPYLVTIGDNEPGITPLIKVWDWSRVDRHGNPQCVRTSRAVP
SHMHPTQATALAVHDNKNLLAVGFQDGSVTLYRGDIARQRSGKMKTLPDTGSSPITGLAF
KGADKLFVVSRACVMVCWTSSERCTVLDAMGAAPACSVLADAHRLTVAATDAIYCYTTEG
RGPCYALEGEKLRLNWFRSYLVITTNETSNKASSSTSTPKSHHITILDIQNKFIVFSKSF
EEIDAVLTEWGSFYILTKNKEMIYLEEKDLQSKLSLLFKKNLYDVAIRIASSQHYDAEGL
TEIYKQYGDHLYNKGDLKCAIDQYVKTIGWLETSYVIRKYLESRHLEPLVQYLEELHKKG
FATEDHTTLLLTCYVKIDQHDHQGKLKEFINSKDKVIDFDVDVAIKVVRQVSVDDALSLA
ANHKRHDWYLRMVIEDKKEFKQALDYIAELEFDDADMFMKKYGHKLIQNEPEESTKLLKL
LCTDYKPRSRPLVDETSLTGRFKEPDRSFPDDFVHMFLSNSERLIDFLEHMIATDTNCSS
LVYNALIEHYIHVWAKSPEAEKKTYEEKVLAVLRDPDADYDKDQTLIICQMLGFKTGILH
LYEEKKLWRSQVALHLRAGQAERALSVCRRRGAACPRLWLDVLWAPPPPACLPELLRVVD
SEKLLSPILVIDCLASTPTYTLGDVRKYLMDVLKSEDEVINREQELASKYKSEIEKMKAQ
IQTIQNEPVIFQSSRCAACNRPLELPTVHFLCQHSFHQDCFQTYSESERECPACAGAAAP
PRAPPAGAELLHSRLLADHDPFAVVSEYFGRGLFNKVTVVTEPPEPSPTAPAPAPAPVPV
PAVAAQSYGPGAEAKLRLQEGQSKQVFVSNTAKQVALKGTSVIPVPEGRMRLMEQQQYSS
SLEANMTKLEPQYHTKKSPLTSPTVVRKREEPKISSTITNDNRNPFDENYDESKNPFADD
TKNDPTNPFADDDDYDKNLNPFS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttagagtggcgtcgttttacattcttcgacgttcataagaatatagacaat
gggaagattgctgagtgtcttcaagatacaaatgtaacagtcgccacaagcggtaacaac
catgtaatcctgtgtgacgtgactggctgggcacatcttatctctcgctcctgggagatc
acatcattcaaggcatatgatttaacagttactcttgcccagcagctgccccatgatcca
tatctggttactattggggataatgaacctggaattacccctcttattaaagtatgggat
tggtcacgtgtggatcgacatggcaacccgcagtgtgtgaggacatcacgagcggtgccc
tcacatatgcatcccacacaggctaccgcattagctgtgcatgataataagaatctctta
gccgttggctttcaagatggctctgtgacgttgtatcgaggagatatcgcgagacagcgc
agtggcaagatgaaaacattaccggatactggatccagtcctataacgggactggctttc
aaaggagctgacaaactgttcgtcgtctcacgagcgtgcgtgatggtgtgctggacgagc
agcgagcggtgcaccgtgctggacgccatgggcgccgcccccgcctgcagcgtgctggcc
gacgcgcaccgcctcaccgtcgccgccaccgacgccatatattgctacacaactgaagga
cgcggcccgtgctacgccctcgaaggagagaaacttcgcctcaactggttccgcagttac
ctagtcatcacaactaatgaaacttcgaacaaggcatcaagctcgacgagtactcctaaa
tcccatcacatcactatattagacatacaaaataaatttatagtattttccaagtccttt
gaagaaatcgatgcggtgttaacagagtggggatcgttctatatcttaacgaagaataaa
gaaatgatatatttggaggagaaagatttgcagtcgaaactctcgttgttgtttaagaag
aatctgtatgatgtggctataaggatagcgagcagtcagcattacgatgctgaagggctg
acggagatctataagcaatatggagatcatttgtataacaagggtgatttaaagtgtgca
atagaccagtacgtcaaaacgattggttggcttgaaacttcatacgtcatacgaaaatat
ctcgaatcaagacatctagagcctctcgttcaatacttagaagaacttcataagaagggg
tttgcaacagaagaccatacgacactcttactgacatgctacgtgaagatagaccaacat
gaccaccaggggaaattgaaagagttcatcaattcgaaggataaagttatagattttgat
gtggatgtcgctattaaggtcgtccgacaagtaagcgtcgacgacgcgctctcactcgct
gcaaaccacaaacgacacgactggtacttaagaatggtgatagaagacaaaaaagaattc
aaacaagcattagactatattgctgaactggaattcgatgatgcagatatgttcatgaag
aaatacggacacaagttgatacagaacgaacctgaagagagcaccaagttacttaaatta
ttatgcactgactacaaacctcgaagccgtccactagttgatgagacttcactcactgga
aggtttaaagagccagacaggtcgtttcccgacgatttcgtccacatgtttctgagtaat
tcggaaaggttgatagatttccttgagcatatgatcgctacggacactaactgctccagc
ttggtctacaacgcgttgatcgaacactatattcatgtttgggcaaaatcccctgaagct
gagaaaaaaacatacgaggaaaaagtccttgcagtattaagagatccagacgcagattac
gataaagatcaaactcttataatatgccaaatgttgggtttcaagactggcattctccat
ctgtacgaggagaagaaactatggcgctcccaagtggcgctgcacctgcgcgcggggcag
gcggagcgcgctctaagcgtgtgccggcggcgcggcgcggcgtgcccgcggctgtggctc
gacgtgctgtgggcgccgccgccgcccgcctgcctgcccgagctgctgcgcgtcgtggat
agtgaaaaactgttatcccctattctagtcatcgactgcctcgccagcacaccgacgtat
actctcggtgatgttcgcaaatatttaatggacgttctaaaatccgaagacgaagtaata
aaccgcgaacaagagctagcttcgaaatacaaaagcgaaatcgagaaaatgaaggcgcaa
atccaaaccatccagaacgagccagtcatcttccagagctcgagatgtgccgcttgcaac
agaccattggaactgcccaccgtacatttcctctgtcagcactcctttcaccaagactgc
ttccaaacgtactccgagtcggagcgcgagtgccccgcgtgcgccggcgccgccgccccg
ccgcgcgcgccgcccgccggcgccgagctgctgcactcgaggcttctggcggaccacgac
ccctttgcagtagtatcagagtactttggacgaggcctattcaataaggtaacggtagtg
acggaacctccggagccttccccaaccgcaccagcaccagcacctgcaccggtgcccgtg
cctgcggtcgccgcacaatcttacgggccgggcgcagaggctaagttgaggctgcaagag
gggcagagcaaacaagtatttgtatcaaacacagcaaaacaggtagccctgaaaggtaca
tcggtgattccagttcctgaaggcagaatgcggctcatggagcaacagcaatacagctcc
agtctggaagctaacatgaccaaattagaaccacaatatcacactaaaaagtccccactc
acttccccaactgttgtcaggaaaagagaagaaccaaagatatcatcaactataaccaat
gataatagaaacccatttgatgaaaattatgatgaatctaaaaacccatttgccgatgac
acaaagaatgatccgactaacccttttgctgatgatgacgattatgacaaaaatctaaat
cctttttcatga
DBGET
integrated database retrieval system
