Nymphalis io (European peacock): 126771910
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Entry
126771910 CDS
T08495
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126771910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
niq03019
]
126771910
03012 Translation factors [BR:
niq03012
]
126771910
Enzymes [BR:
niq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126771910
Messenger RNA biogenesis [BR:
niq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126771910
Translation factors [BR:
niq03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126771910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_N
HA2_C
nSTAND3
AAA_19
Cas3-like_C_2
AAA_22
RsgA_GTPase
AAA_11
ABC_tran
DUF2779
Motif
Other DBs
NCBI-GeneID:
126771910
NCBI-ProteinID:
XP_050348028
LinkDB
All DBs
Position
11:complement(7137066..7149520)
Genome browser
AA seq
1046 aa
AA seq
DB search
MSRGFNNWSRPRGSRGKQWGGQRQRIVPPGLRGKEIGMYFRGLQVKKQKKEIVINLKIPI
MILTSLETNLKAIAKIAARQNISLPQNRKSDSFKNNMQIKDIKTGASDDVNIQNESSSDE
YNEEKEQKVGNTSNISCEAGPSTLSDFIPLSQEVENDYGSEPKLCALRLLSNYKYGYNDI
ITGSFNDKLDECLAKGVSISFVNSDTARLNTAFFDEYEDMIQKTDYKKMLTFREKLPTYT
KAKDVLNIIQNNQVVVISGETGCGKSTQVPQLILDEAICAKRGANVKIMVTQPRRIAASS
LAIRVAKERGESLGNSVGYAVRLERAEERARGSIQYCTTGILLAELEVNQGLSGYSHIIL
DEVHERDVHVDLSMCMLKQVLKKRQDLKLILMSATIDAESLSGYFDNCPLMHIEGLAYPV
RDVYLEDILGFTKFRLPPEKVKQTNPKWKQYRNRQCDQMEKDINYKAEIAQWLESKKKDL
SYDVYKTLQDSRIEELNLELVVELLIYICKGKEGAILVFLPGIAQITSLMKLMDESKCFP
RSCYEIYPLHSKLPTLEQHKIFEKPRGNIRKIIIATNIAETSITIDDIVYVVDCGKIKIK
GLHIDQNITTLNTEWVSQANLRQRRGRAGRCQPGICYHLITTFRAQNIPERLLPELQRSN
LLEPVLMIKKLRLGLAVEALKLVPSPPAETTVNWAVKHLQSCGALDDNETLTPLGWHLAR
LPVHPAAGKLLLFGALFGCLDRAASIAAVWGFKDPFMLVIGKEREVDIVKRNMSLGEPSD
HIAISEAILEWENRPHSSRRSFAYDNYLSNNTLQLLYDMKKQLGNDLRQMGFLPSGNIRS
SWENRNAQNLSLFKAIVAASLYPNIAQVKWSNSRNIRKVPRFKAFSPEDGKLSIHPSSVM
AGVRGGAPMTLCNNPGANWLVYWLKQRTSDLFLLDVTLIYTLPLLFFGEFAVDTVDPEYC
LIAISTTKVRCQRESASKLFELRSLLDNVLASKITDTNTHSIHNSEFENQILNTVIQLIT
AEDEQMEYLSDEIPDSDRESETEDKW
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcggttttaataactggtccagacccagggggtcaagaggaaagcaatggggt
ggtcaaagacaaagaatcgtccctccgggtctacgaggtaaagaaattggaatgtatttt
agaggacttcaagtgaaaaaacaaaaaaaggagatagtgattaacctaaaaatacctatt
atgattttaacatcactggaaacaaatcttaaggcgatagcaaaaattgctgctcgccag
aatatttctttgccccaaaataggaaatctgacagtttcaaaaataatatgcaaatcaaa
gatattaaaactggagcatctgatgacgtaaacattcaaaatgaatcatcctcagatgaa
tataatgaagagaaggaacaaaaagtgggaaatacctcaaatatttcttgtgaagctggt
ccttctacactttctgattttattccattgagtcaggaagtagaaaatgattatggttct
gaaccaaaactttgtgctttaaggctactaagcaattacaaatatggttataatgacatt
ataactggatcgtttaatgataaacttgatgaatgtctcgcaaaaggtgtcagtattagt
ttcgtgaattctgacactgcgagactcaatacggctttttttgatgaatatgaagacatg
atacaaaaaaccgattataaaaaaatgttgacgttccgtgagaaattaccaacatatacc
aaagcaaaggatgtattgaatataatccaaaacaaccaagtagttgttattagcggggag
acaggttgcgggaagtcaactcaagtaccacaattaatattagatgaagcaatatgtgcc
aaaagaggagccaatgtgaaaattatggttacacagccgagacgcatagctgcgtcgtca
ttagctatcagagttgccaaagaaagaggcgagagcctcggtaattcagtaggttatgca
gtaagattagaaagggccgaggagagagctcgtggaagtattcaatattgtaccacaggt
atacttttagctgaattagaagtaaaccagggcttatccgggtatagtcacataatttta
gatgaagtacatgaaagagatgtacatgtagacttgtctatgtgcatgctaaaacaagtt
ctaaaaaagcgtcaagatttaaaactcattcttatgagtgcgactatagacgccgaaagt
ttgtcgggctattttgataattgccctctaatgcatatagaagggctagcgtacccagtc
cgagatgtttatttagaagatatattggggttcacaaagttcagattaccaccagaaaaa
gtcaagcaaacaaatcctaaatggaagcaatacagaaacagacagtgtgatcaaatggaa
aaagatatcaattacaaagctgaaattgctcaatggctagaatcaaaaaagaaagatttg
agctatgatgtctataaaacgctccaagactctaggattgaggaattgaatttggagttg
gttgtagaacttctgatttacatatgcaaaggtaaagaaggggcgatactagtgttctta
ccaggaattgctcaaatcactagtcttatgaaattaatggatgaaagtaaatgttttcct
cgctcatgctacgaaatatatcctctacattcaaagttgcccacgttagagcagcacaaa
atatttgaaaagccaagaggaaatattaggaaaattataatagcgacaaacattgccgaa
acatcaataacgattgacgatattgtgtacgtagtggattgtggcaagattaaaataaag
ggcctgcacattgaccagaatataacaactctcaatactgaatgggtctctcaagccaat
ctacgacaaagacgaggccgcgctggcagatgccaaccaggtatatgttatcatttaata
acaacgttccgggcacaaaatatcccagaacgactcctacccgagctacagaggagcaat
ctcctggagccggtactgatgattaagaagcttcgtctaggattagctgtggaggctctg
aaattagtgccgtcaccaccagccgaaacgactgtcaattgggcagtgaaacatttgcaa
agttgcggtgctttagacgacaatgaaacgttgacacctctcggctggcatttggcgcgc
ttgccggtacatccggctgcgggcaaactattgctgtttggtgccctcttcggttgcctc
gatcgcgctgccagtatcgctgcagtgtggggatttaaagaccctttcatgcttgttatt
ggaaaagaaagagaagtcgatattgtgaaacgaaatatgtctctgggggaacccagtgac
catattgcaatttccgaagcgattcttgaatgggaaaaccgccctcactcatcgagacgg
tcatttgcatatgataattatctttccaacaatactctgcaattgctatacgatatgaag
aaacagctgggtaacgatcttcgtcagatgggattcctgccgtcgggcaacataagatcc
tcgtgggaaaatcgaaatgcccaaaacttgagtttatttaaagctatagttgctgcgtct
ttatacccaaatatagctcaagtcaaatggtcgaacagtagaaatatacgcaaggtgcct
agattcaaagcattcagtccagaagatggaaagttatcgatacatccaagtagcgtgatg
gccggagtgagaggcggtgcaccaatgacgctatgtaacaaccctggcgctaactggctt
gtctattggttgaagcaacggacgagtgacctcttccttctggacgtgactttaatatac
acattacctttgctgtttttcggcgaatttgccgttgatacagtcgatcccgaatactgt
ctaatcgctatatcaactaccaaagtccgttgtcagagagaaagtgctagtaaacttttc
gaattgcgaagcttattagacaacgtactagcatcgaaaattacagatacaaatactcat
tcgatccataatagtgaatttgaaaatcaaatcctcaatactgtcattcaactaattaca
gctgaagatgaacagatggagtacttaagtgacgaaataccagattctgaccgtgaaagt
gaaactgaagataaatggtaa
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