Nymphalis io (European peacock): 126772179
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Entry
126772179 CDS
T08495
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126772179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
niq03400
]
126772179
DNA repair and recombination proteins [BR:
niq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126772179
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_27
DUF2452
DUF724
Syntaxin-18_N
Motif
Other DBs
NCBI-GeneID:
126772179
NCBI-ProteinID:
XP_050348358
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Position
12:2393308..2411583
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AA seq
851 aa
AA seq
DB search
MGIEPNKLDYLVLSKGNFEILIRKLLLVRRYRVEIYVAEGSVRACEWSVKYKGSPGYLSQ
MEEILGDGLGSSEEHAPCLMAVNIKTDPVTKGRLLGVACVTPGEYVMSVSEFTDDDLLTE
LETITVQMAPSECLISPTDNDDYKSLKKVMERANVTVTKLKKAEFSTEGLNQDLNRLLKF
KDGQQQDANAFPELDKQVAMTSLAATVRYTSLLNDNTNFGRFRLTTIQADCFLHMDAAAL
KALNVFPELGDTNHAPSRSLYGLLDRCRTQHGKRLLAQWLRQPLRDINLINERLDIVELL
MNNSQLRQQLHEGHLRRIPDLQALARRLTRKKANLQDCYRIYQAINRLPSLLQCLAEAND
ATLHSSLAEPISELSNDLDKYQQMIEATVDMDAVDRGDYLVKPSFDEQLQSLADQLEKLQ
SSAERELNKAARDLGLDAGKAIKLESNPQNGFNFRVTLKEEHGLRGNKKYTIIDAVKSGV
RFKNSALESITEEYLQTKSTYEKEQDKVVTEIIGIAGGYSECLCCLSLQLSRLDVLLAYS
LAATSAPAPYCRPVLSPHLDELVLIDLRHPCLEVQEGVSFIPNDVVFKRESCVLHVVTGA
NMGGKSTWLRAAGAAALLAHAGAAVPAARAALPALRALLARLGAADCERRGHSTFMMEMV
EAAAILRTATPDSLVLIDELGRGTSTYEGCGIAWAIAEKLATEIKCFCLFATHYHELTRL
PSLHPNVIVNSHAEASVVDQQLVLLHKILPGPATQSLGLHIAKLADLPDSIIQYAEAQQA
QLETNLFEIESAFKSEENTEGQKLISDFLQKCKEIHNSITSDDEMLIEINKLKQQMLDKD
SKYVQALMSTL
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcgaaccgaacaaacttgactaccttgtgctatctaagggaaactttgagatt
ctcataaggaaattactactggtgcgtcggtacagggtggaaatatacgttgcagagggt
tccgttagagcatgcgagtggtcggtcaagtacaaaggctcgccgggctatttgtcccaa
atggaggaaattttaggcgacggtctgggctcctctgaagaacacgctccttgtttgatg
gctgtcaacatcaaaaccgaccctgtgaccaaaggtcggctgctgggtgtcgcgtgcgtc
acgccgggggagtatgtgatgtccgtgtcggagttcacagacgacgatctgttgacagag
ctcgagaccatcaccgttcaaatggcaccctcagaatgtttaatatcaccaaccgacaac
gatgactataaatctcttaagaaagtgatggagagagcgaatgtgaccgtaaccaagttg
aagaaggcggagttttcaacggaagggctgaatcaagacttgaatagattactgaagttc
aaagacggacaacagcaggacgccaacgcgtttcccgagctggacaaacaagtggctatg
acgagcttggcggctactgttagatatacttcgctgttgaatgataatactaatttcgga
agatttcgactaacaacaatacaagcagactgcttcctccacatggacgccgctgctctg
aaagcgctcaacgtattccccgaactgggggacacgaaccacgcaccttctagaagctta
tacggacttctagatagatgcaggacacagcatggaaaacggctattagctcaatggctt
cgtcaacctcttcgagatataaatctgataaacgaaagactggatattgttgaactacta
atgaacaactcacaacttcgtcaacaactgcacgagggtcatctcaggaggataccggac
ttgcaagccctggccagacggctgacgaggaagaaagccaacttacaagattgttaccga
atttatcaagccataaatagactgccatccttgctacaatgtttggcggaggcgaatgac
gcgaccttacactcgtctctagcggaaccgatatcagaactgagcaacgaccttgataag
tatcaacagatgatcgaggccacagtcgacatggacgccgtcgacagaggtgattaccta
gtgaagccatcgtttgatgaacaattacaaagcttagccgatcagctggagaaactgcag
tcatctgcggagagggaactcaacaaggctgccagagacttgggcttggacgctgggaaa
gctatcaaactcgagagcaatccgcaaaatggttttaactttagagtgactttaaaagaa
gaacacggtcttcgtggtaataagaagtacacgataatcgacgcggtcaagagcggagtc
agatttaagaatagcgcgttagaaagtatcaccgaagagtatttgcaaacgaaaagtacc
tacgagaaggaacaagacaaagtcgttacggaaatcatcggtattgctggcggctactcg
gagtgcctgtgctgcctgtcgctgcagctgtcccgcctggacgtgctgctggcctactcg
ttggcggccaccagcgcgcccgccccctactgccgcccggtactctccccccacctggac
gagctggtgctgatcgacctgcgccacccgtgtctggaggtgcaggagggcgtttccttc
atccccaacgacgttgtgttcaagcgagagtcgtgcgtgctgcacgtggtgacgggcgcc
aacatgggcggcaagtcgacgtggctgcgcgcggcgggcgctgcagcgctgctggcgcac
gcgggcgccgccgtgcccgccgcgcgcgccgcgctgccggcgctgcgggcgctgctggcg
cgcctcggcgccgccgactgcgagcggcgcggacacagcaccttcatgatggagatggtg
gaggccgccgccatcctcaggactgcaacaccagactccctcgtcctcattgacgaactc
ggtcgaggcacatctacttatgaaggctgcggaatagcttgggcaatagcagaaaaacta
gcaacggaaattaaatgtttctgtctattcgcgactcactatcacgaattgactcgactc
ccgagcttacatccgaatgtgatcgtgaattcccacgccgaagcctccgttgtggaccaa
caattggtgctgctgcataaaatcctaccggggcccgcaacgcaatcgctgggactgcat
attgccaagctggctgatcttcctgactcaatcattcagtacgctgaagctcaacaggcg
caattggaaaccaacctatttgaaattgaatctgccttcaagtccgaagaaaacaccgaa
ggacagaagttgatatcggactttttgcaaaaatgcaaagaaatacataactctattact
tcagatgatgaaatgttaatcgaaataaataaacttaagcaacaaatgttagacaaggat
agtaaatatgtgcaggcgttaatgtcgaccttgtaa
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