Nymphalis io (European peacock): 126774176
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Entry
126774176 CDS
T08495
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03022
Basal transcription factors
niq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126774176
09124 Replication and repair
03420 Nucleotide excision repair
126774176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niq03021
]
126774176
03400 DNA repair and recombination proteins [BR:
niq03400
]
126774176
Enzymes [BR:
niq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126774176
Transcription machinery [BR:
niq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126774176
DNA repair and recombination proteins [BR:
niq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126774176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
Motif
Other DBs
NCBI-GeneID:
126774176
NCBI-ProteinID:
XP_050351531
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Position
16:7389010..7396074
Genome browser
AA seq
778 aa
AA seq
DB search
MGPPKKIKKYDSKSGSDRSGKKKKVEEDVTIDLVDDDNPENAGVPGAAMQDAEKNDQVPE
DEFGAKDYRSQMELKPDNASRPLWVAPNGHIFLEAFSPVYKHAHDFLIAIAEPVSRPQHI
HEYKLTAYSLYAAVSVGLQTNDIVEYLQRLSKCTVPAGIIEFIQLCTLSYGKVKLVLKHN
RYLVESKHVDVLQKLLRDPLVQQCRLRRDGEHEIMTTAPAAPPALAAKPGEEKPASNGAV
PEDISQFYQQLDKDDDDDETTDITAKNTAVAFEVDPDKIEVIQKRCIELEYPLLAEYDFR
NDTVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAVCTVR
KRALVLCNSGVSVEQWKQQFKCWSTADDSMICRFTSEAKDKPMGAGILITTYSMITHGQR
RSWEAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLGLTATLLREDDKIA
DLNFLIGPKLYEANWLELQAHGYIARVQCAEVWCPMTPEFYREYLVQKINKKMLLYVMNP
SKFRACQFLVRYHERRGDKTIVFSDNVFALRHYAVKMNKPYIYGPTSQSERIQILQNFKF
NPKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILRAKKGALAEEYNAF
FYTLVSQDTLEMAYSRKRQRFLVNQGYSYKVITELKGMDQEPDLFYGTREEQGMLLQQVL
AASETDCEEEREGAAGAGGARRAGGSLASLAGADDALYLEHRRAAQHNKHPLFKKFRY
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggaccacctaaaaaaattaaaaaatatgactccaaaagtggaagtgacagatcaggc
aagaaaaagaaagtcgaagaagatgttacaatagatctcgtagatgatgataatccagaa
aatgcaggtgtacctggtgcagctatgcaagatgcagagaaaaatgatcaagtacctgaa
gatgaatttggtgctaaggattacagaagccaaatggaacttaaaccagacaatgcaagt
cgccctctgtgggtagcacccaatggccacatatttcttgaagcattttcacctgtttat
aaacatgctcatgatttcctcatagctattgctgaacctgtctctagacctcaacatatt
catgagtacaaattaacagcatacagtttatatgcagctgtgtcggtagggctgcaaaca
aatgacattgtggaatacttgcagaggctcagcaaatgcactgtgcctgccggcattata
gagtttattcaactctgtactttgtcttacggcaaagtgaaacttgttctaaaacataat
agatacctggtggagagcaagcacgtggacgtgctgcagaagctgctgcgggaccccttg
gtgcagcagtgccgcctgcggcgcgacggcgagcacgagatcatgacgacggcgcccgcc
gcgccgcccgcgctcgccgccaagcccggtgaagaaaagccggcctccaatggagccgtt
cctgaagatattagccagttctaccagcagctggacaaagacgatgatgacgacgagacc
accgacattacggcaaagaacaccgcggtagctttcgaagtggaccctgacaagatcgag
gttatacaaaaacgatgcatcgaactggagtatccgcttctagctgaatacgatttccgc
aacgacacagtgaatcctgatataaatatagacttgaaaccgaccgccgtgcttcgtccg
taccaagagaagagtcttcggaaaatgttcggaaatggacgagcgaggtcgggcgtgatc
gtgctgccgtgcggcgccggcaagtcgctggtgggcgtgacggccgtgtgcacggtgcgc
aagcgcgcgctcgtgctgtgcaactcgggcgtgtcggtggagcagtggaagcagcagttc
aagtgctggtccacggccgacgacagcatgatctgccgattcacgtcggaggcgaaggac
aagccgatgggcgccggcatcctgatcacgacgtactccatgatcacgcacggacagcga
cgctcgtgggaggccgagcagaccatgaagtggctgcaagcgcaggagtgggggctggtg
gtgctggacgaggtgcacaccattcccgccaagatgttccgacgcgtgctcaccatcgtg
cactcgcacgccaagctcggtctgacggcgacgttgctgcgtgaggatgacaagatcgcc
gacttgaacttcctgatcgggccgaagctgtacgaggccaactggctggagctgcaggcg
cacgggtacatcgcgcgcgtgcagtgcgcagaggtgtggtgccccatgacgcccgagttc
taccgcgagtacctcgtgcagaagattaacaaaaagatgttgctgtacgtgatgaaccct
tcgaagttccgcgcgtgccagttcctggtccgctaccacgagcgacggggggacaagacc
atagtgttctcggacaacgtgtttgcactgcgacactacgccgtcaaaatgaacaagccg
tacatctacgggccgacgtcgcagagcgaaaggatacagatattgcagaacttcaagttc
aatccaaaagtgaatacaatatttgtgagcaaagtcgccgataccagcttcgatctaccg
gaagctaacgtcttgatacagatatcttcgcacggaggttcgagaaggcaagaggcgcag
cgcttaggtcgaattttgagagcaaaaaaaggagcactagcagaagagtacaatgcgttt
ttctacacattagtatcgcaggataccttggagatggcgtacagtcgtaaaagacaacgg
tttctagttaatcaaggttacagttacaaggttattactgaattaaaagggatggatcaa
gagccagacttattttacggtactagagaagagcaaggcatgctactacagcaagtgctg
gcggcgtcggagacggactgcgaggaggagcgcgagggcgcggcgggcgcgggcggcgcg
cggcgcgcgggcggctcgctggcgtcgctggccggcgccgacgacgcgctctacctcgag
caccgccgcgccgcgcagcacaacaagcacccgctcttcaagaagttccgatactga
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