Nymphalis io (European peacock): 126774399
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Entry
126774399 CDS
T08495
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126774399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
niq03041
]
126774399
03009 Ribosome biogenesis [BR:
niq03009
]
126774399
Enzymes [BR:
niq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126774399
Spliceosome [BR:
niq03041
]
Complex A
U1 snRNP components
U1 related factors
126774399
Complex B
126774399
Ribosome biogenesis [BR:
niq03009
]
Eukaryotic type
Pre-60S particles
Helicases
126774399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
126774399
NCBI-ProteinID:
XP_050351868
EnsemblRapid:
ENSIIOG00005004817
LinkDB
All DBs
Position
16:complement(6031924..6075257)
Genome browser
AA seq
514 aa
AA seq
DB search
MALNVLKSFLQRKDFFNLLLKDGKKISQSRAYSIGLCSDSKVKANYIALRSNVARNWQLT
CFSVKNQLYSTQIAQQSDSEYCNENNITIIGDDVPSPVRDIDTSNLPDYIKIFLKEQGFT
KPTVIQSQGWPIAISGKNFVGIAQTGTGKTLAYLLPAAIKLKENKGRKGRGPRVLVLAPT
RELAKQIEVVAKDFQKLLNIRCLCIYGGVSRTGQAEELRAGIDILIATPGRLNDFINSKV
TNLSRCTYVVLDEADRMLDMGFEPQIREALEEVPHDRQILMFSATWPKEVQYLAKDYLGE
FVQVNVGSTELSANHNIQQHIHVCDQEEKMNKFKSIMHDVSGQGFGKMLVFTNTKKFVDS
LSLMLRRNGWPAVGIHGDKTQFQRDNVIDKFRSGKINILVATDVAARGLDVEGVTHVINY
DYPNTSEDYIHRIGRTGRLQNTGIAHTILTSENARQAKSLIAVLKEANQEVPEVLQQLAK
ENEKNKYQQSRYAPNKYNSHTNGKWNKFRSNKMY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttaatgttttaaaaagttttttacaacgtaaagatttctttaatttactcttg
aaagatggtaaaaagatatcgcaaagcagagcatattcaattggattatgtagtgacagt
aaagttaaagcaaattatatagctttacgaagcaatgtagccagaaactggcaattaact
tgtttttcagttaagaatcaattatattcaacacaaattgcacaacaaagtgatagtgaa
tattgtaatgaaaataatattactataattggggatgatgtacctagcccagtaagagat
attgacacaagcaatcttccagactatatcaaaatttttttgaaagagcagggctttaca
aaaccaacagtaattcagtctcagggttggcctattgcaatatctggtaaaaatttcgtt
ggtattgctcagacaggtactggaaaaacattggcgtatttattgccagcagctattaag
ttaaaagaaaataaaggacgaaaaggaagaggcccaagagtgttagttttggcgcccact
agagaattagcaaagcagattgaagtagttgcaaaggattttcaaaaattattaaatata
agatgtttatgtatatatggtggtgttagtagaacaggacaagctgaagagttaagggct
ggtattgatatattaatagccacacccggtagattaaacgattttattaacagtaaagtc
acaaatctaagtcgctgtacctacgttgtgttggatgaagctgacaggatgttagatatg
ggctttgagcctcagattcgagaggctttggaggaagtacctcatgacagacaaattttg
atgttttccgctacatggcctaaggaagtacagtatttggcaaaggattatttaggagag
tttgtccaagtcaatgttggttctacagaattgtcagcaaatcacaacattcaacagcat
atacatgtttgtgatcaagaagaaaagatgaacaagtttaaatcaattatgcatgatgta
tcaggacaaggctttggtaaaatgctagtttttaccaatacaaagaaatttgttgacagt
ttgtctcttatgttgagaagaaatggttggccagctgtaggtatacacggtgataagact
cagtttcaaagagataatgtaattgataaatttagaagtggtaaaataaatatacttgtt
gcaactgacgtagcagctagaggattagatgtggaaggggtaacacatgtaatcaactat
gattaccccaatacttcagaagactatatccacaggattggacgaacaggtcgcttgcag
aatactggcattgctcatacaatccttaccagtgaaaatgcaagacaggctaaaagtttg
attgctgtcttaaaagaagcaaatcaggaagttccggaggtcttacagcagttagccaaa
gaaaatgagaaaaacaagtaccagcaatcgagatatgctccaaacaagtacaattcacac
acgaatgggaagtggaataaatttcgtagtaataaaatgtattag
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