Nymphalis io (European peacock): 126775223
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Entry
126775223 CDS
T08495
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03013
Nucleocytoplasmic transport
niq03015
mRNA surveillance pathway
niq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126775223
09122 Translation
03013 Nucleocytoplasmic transport
126775223
03015 mRNA surveillance pathway
126775223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
niq03019
]
126775223
03041 Spliceosome [BR:
niq03041
]
126775223
Enzymes [BR:
niq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126775223
Messenger RNA biogenesis [BR:
niq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126775223
Spliceosome [BR:
niq03041
]
Complex C
Other components
EJC/TREX
126775223
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126775223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126775223
NCBI-ProteinID:
XP_050352974
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All DBs
Position
18:7349555..7351210
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AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQADQQVADGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNHVYVLVMCHT
RELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEDVLKTACPHIVVGTPGRILALVNS
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPEEIELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacgacgatcttctcgactacgaagatgaagagcaggcagatcagcaagtc
gctgatggagcgaccgaagcggcgccaaaaaaagaggttaagggatcctacgtatcgatt
cacagttcaggcttcagagattttcttctcaaacctgaaattctaagagccattgttgac
tgtggtttcgagcatccatcggaggtacaacatgaatgcatcccgcaggcggtacttggt
atggacatattatgtcaagccaaatccggtatgggaaaaaccgcggtttttgtgttggca
acgttgcaacaactggaaccttctgataatcatgtctatgtacttgttatgtgccacaca
agagaattggcgttccagatcagcaaagaatatgagcgcttctctaagtatatgtccggt
gtcagagtgtcagtattcttcggagggatgccgatccagaaagatgaagatgtgctaaaa
acagcatgcccccatatcgtcgtcgggactccaggtcgaattttagcattagtaaacagt
aagaaattaaatctgaaacacttaaagcactttatcctagatgagtgtgacaagatgttg
gagtccctcgacatgcgacgcgacgtgcaagagatattccgcaacactcctcacgggaaa
caagttatgatgttttctgccacattaagtaaagaaatcaggccagtttgtaagaaattc
atgcaggatcctatggaagtgtatgttgacgatgaagcaaaactaacattgcacggtcta
caacaacattatgttaagcttaaagaaaatgagaaaaacaaaaagctgtttgagctctta
gatgtattagaatttaatcaagtggttatatttgttaaatctgttcaaagatgcatagca
cttgctcaactcctgactgaccagaatttcccagctattggtatccacagaaacatgaca
caagatgagcgtctttcccgttaccagcaatttaaggacttccaaaaaaggatattagtc
gccacaaatttatttggaagaggaatggacattgaaagagtcaacattgtcttcaactat
gatatgcctgaagattctgatacatacctgcacagagttgctagagctggtagatttggt
acgaaaggattagccataaccatggtatcagatgaaaatgatgcaaagatacttaatgaa
gttcaagatcgttttgatgtcaacataacagagctccctgaggaaattgaactatctaca
tatattgaaggacgataa
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