Nymphalis io (European peacock): 126775888
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Entry
126775888 CDS
T08495
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03008
Ribosome biogenesis in eukaryotes
niq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126775888
09123 Folding, sorting and degradation
03018 RNA degradation
126775888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niq03021
]
126775888
03019 Messenger RNA biogenesis [BR:
niq03019
]
126775888
03009 Ribosome biogenesis [BR:
niq03009
]
126775888
03016 Transfer RNA biogenesis [BR:
niq03016
]
126775888
Transcription machinery [BR:
niq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126775888
Messenger RNA biogenesis [BR:
niq03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
126775888
Ribosome biogenesis [BR:
niq03009
]
Eukaryotic type
Pre-60S particles
RNases
126775888
Transfer RNA biogenesis [BR:
niq03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
126775888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
126775888
NCBI-ProteinID:
XP_050354001
LinkDB
All DBs
Position
19:712467..838453
Genome browser
AA seq
976 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIVECIEQRPTDVDGQLIHADSSLPNPNGVEFDNLYLDMNGIIH
PCTHPEDKPPPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
ASKETQEKIEEVARIRSELQVKGAYLPPERPKEAHFDSNCITPGTPFMDRLSKCLHYYIH
DRLNNDPGWKGVKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADLIML
GLATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTTPDASLVRSDPAFGNQDSFI
FVRLSVLREYLEKELQMPNLPFDYDFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR
LVNLYKKCVYKTRGWITDSGDVNLDRVQVIMDELGRVEDEIFRRRHQNEVSFKAREKAKK
QQKVNFSLLENTQFAPAPLGGASKTVENARQEAANIRRAGMEAVAQRDGPARGRKRSASA
AGLDGAGGADGADDAGDADAHDEVRLWEEGFKERYYESKFEVARDNLEFRYRVALQYVRG
LCWVLRYYYQGCASWKWYFPYHYAPFASDFVNIQGLSTKFEKGTQPFRPLEQLMGVFPAA
SAQHVPQPWATLMSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDETRLFKALEPY
YKELTQAEKQRNTKGHDRLYVSPANKCYDFLLALYTEAGDDLRRLIEADQRYPFRCEGVR
GDVMLSVDNVCTGGQLSSPVIGLSPVLGNRVVCVRFQDPQYPDEFVFPARRLRGAQQPAR
VLKPGNLSHEQNRNWRPQIGMVRASSQASLEAAGHRMLGHALPRAHYASVPPPHNRSQSF
GPHRGGYVPHQISHSNQGYNRSGYQPSQDRYGSNQDRYGSNQDRYGSNQDRYGSNQDRYG
SNQGYRQNQGSHGRSYSHNQGHGYSSTQNKYSGHQGHHQRQGSDQQGPPSHGQGSSYNSQ
RPNAGSNRYQGNSTWR
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccagcattcttccgctggctgagccgcaaatatccaagcgttattgtcgaa
tgtattgaacagaggccaaccgacgtagatggccagctcatacacgcagactcgtcatta
ccaaaccctaatggggtcgaatttgacaatctatatttggacatgaatggaatcatccat
ccttgtacgcatcctgaagacaaaccgccgccaaaggatgaggacgagatgatggtggcg
atcttcgaatgtattgacaggctgttccgcatcgtgcggcccaggaaattgttgtacatg
gctatcgatggagttgcgcccagagctaagatgaatcaacaaagatctcgtcgattcaga
gcctcaaaggaaactcaagaaaagattgaggaggtagctcgcatcaggtctgaacttcaa
gtaaaaggagcatacttaccccctgagagacccaaggaggcacactttgactctaactgt
atcactcctggtactccattcatggatcggctcagcaagtgtttgcactattatatacat
gacaggttaaacaatgatcccggatggaaaggtgttaaggttattttatctgatgctaat
gttcccggggaaggggaacacaagattatggactatattagaagacaaagagctcaacca
gaccatgacccaaatacacagcatgtattatgcggtgctgatgcagatctcatcatgttg
ggtcttgcgacacacgagcctaacttcaccataatcagggaggagttcaaaccgaataag
cctagaccctgtgatgtttgtggtcagctagggcatgagatgaaggaatgcacagggact
actccagatgcatctctagtccgttcagatcccgcctttggtaaccaggacagcttcatt
ttcgtgcgactgagcgtgttgcgagaatatcttgaaaaagagctgcagatgcccaacctc
ccatttgactacgactttgagcgtgccctggacgactgggtgttcatgtgcttcttcgtg
ggcaacgatttcctgccgcatctgcccagtctcgagatcagggagggggccgtggatcgg
ctcgtcaacctatacaaaaaatgcgtctacaagaccagaggttggatcacggattcgggc
gatgtgaacttagatcgagttcaagttataatggacgagttgggccgcgtcgaggacgag
atcttccgccggagacaccaaaatgaagtgagcttcaaggcgcgcgagaaggctaagaaa
caacagaaggtcaactttagcttactggaaaatacgcagtttgcaccagcgccgctagga
ggcgcttcgaaaacagtggagaacgctcgtcaagaagccgctaatataagacgggccgga
atggaagctgttgcccagcgcgacggcccggcgcgcgggcgcaagcggtcggcgagcgcg
gcggggctggacggcgcgggcggcgcggacggcgcggacgacgcgggcgacgcggacgcg
cacgacgaggtgcgcctgtgggaggagggcttcaaggagcgctactacgagagcaagttc
gaggtggcgcgcgacaacctcgagttccggtaccgcgtggcgctgcagtacgtgcgcggc
ctgtgctgggtgctccgctactactaccagggctgcgcaagctggaagtggtacttcccc
taccactacgcgcccttcgcctctgatttcgtcaacatacagggactgtccaccaagttc
gagaagggcacgcaacccttccgccccctggagcagctgatgggggtgttcccggccgcc
agcgcgcagcacgtgccgcagccctgggccacgctcatgagcgaccccttttctccaata
atcgacttttatccaacggactttaagatcgatttgaatggtaagaagttcgcgtggcaa
ggagtcgccttgctacccttcgttgacgagacaagactgttcaaagctctggaaccgtac
tacaaggaactgacgcaagcagaaaaacaacgcaacaccaagggccacgaccgcctgtac
gtgtctcccgctaacaagtgttacgacttcctgctggcgctgtacacggaggccggcgac
gacctgcggagactcatcgaggccgaccagcgctaccctttccgctgcgagggggtgcgg
ggggacgtcatgctcagtgtcgacaacgtctgcacgggcgggcagctgtcgtcgcccgtg
atcgggctgagcccggtgctgggcaaccgcgtggtgtgcgtgcggttccaggacccgcag
tacccggacgagttcgtgttcccggcgcggcggctgcgcggagcccagcagcccgcgcgg
gtgctcaagccgggcaacctgagccacgagcagaacaggaactggaggccgcagatcggc
atggtgcgcgccagcagccaggcgtcgctggaggcggccggccaccgcatgctgggccac
gccctgccgcgcgcgcactacgcctccgtgccgcccccgcacaatcgttcacagtcgttt
ggaccacaccgaggcggatatgtgccgcatcagatatcccatagcaatcaagggtacaac
cgttctggttaccagcccagtcaagataggtacggttcaaaccaagacagatacggctca
aaccaagacagatatggttcgaaccaagacaggtatggctcgaaccaagataggtacggc
tcaaaccaaggctaccgacagaaccagggttcgcacggccgatcatattcccataatcaa
ggtcacggttattcttcaacacaaaacaaatacagcggccaccagggacaccatcaacgg
cagggaagcgaccagcaagggccgcccagccacgggcaggggagcagttacaacagtcag
agacccaacgccggctcaaacagataccagggtaactcgacgtggcgttga
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