Nymphalis io (European peacock): 126776338
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Entry
126776338 CDS
T08495
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03022
Basal transcription factors
niq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126776338
09124 Replication and repair
03420 Nucleotide excision repair
126776338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niq03021
]
126776338
03400 DNA repair and recombination proteins [BR:
niq03400
]
126776338
Transcription machinery [BR:
niq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126776338
DNA repair and recombination proteins [BR:
niq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126776338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
126776338
NCBI-ProteinID:
XP_050354750
LinkDB
All DBs
Position
20:complement(8184284..8194609)
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AA seq
570 aa
AA seq
DB search
MTTSSEDVLLSVGHVRYKKGDGTLYVMNQRLAWMMENRDTVAVSHKYADIKTQKISPAGK
PKVQLQVVLHDGTCSTFHFVNPAGADAQAKDRDQVKMLLQNLLPKFKRQIDGELEMKSRL
LSLHPTLKHLYEDLVISKVINSEEYWNTPTLKHYTESTNMKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHIDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKMDDQAIASAMKHTTLDLTVDLPQFTEPLPLLPEEDSGEKEKDGTSIHRSMI
KRFNQHSIMVLKASHKTNSSNSSSNNSSKTTNNNKVENGMKETNGVEKRPTSDKDPTEPV
DKKKRIMEKLHYEDLDSISSRQDAQELKLSKVERYLLGPASQVSQSSTSTNNPPPLSALA
SVCQAWSSGQQCQRPVRVSAAAAVGALGELSPGGALMRQHHAACMAQLVPQDVKSELNRL
YLSGGELLRELWRCFPQPGASNDAEDTPARAEKFYEALLRFRNVKLRPFEEKMLRDLTPL
ATSLTRHMNQMIDTACAKYALWQQRQAKLR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgactacgtcgtcagaagatgtattattaagtgtgggtcatgttaggtataaaaaagga
gatggtactttatatgtgatgaatcaaagattggcttggatgatggaaaatcgcgacaca
gtcgctgtatcacataagtatgcagatattaaaactcaaaaaatctctcctgctggcaag
ccaaaggtgcagctgcaagtagtccttcatgacggaacatgttcaacatttcattttgtt
aacccagctggagccgatgctcaggcgaaagatagggaccaagttaaaatgctacttcaa
aacctcttacctaaattcaagagacagatagatggagaattagagatgaaatctagactg
ctgtcacttcatccaaccttaaagcatttatatgaagacttagtgatatcgaaagtaata
aatagtgaggaatactggaatacacccactttgaaacattatactgaatcaactaatatg
aaacaagaggccggtgtctccggagcattcttagcagatatacaaccgcagacagacgga
tgcaatggcctaaaatataatctaacacaggacatcatagatgcaatattcaaaacatat
cctgctgttaggaagaaacatatagactatgtacccaataaaatgacagaagctgagttc
tggaccaagttttttcaatcacattattttcacagagatcgtatagcatcatcgtccagt
aaagatttattcggtgaatgtgccaaaatggatgatcaagctatcgcgtccgctatgaaa
cataccacattggatctaacagtcgatttacctcaattcacggaacctctcccactcctg
cccgaggaagattctggtgagaaagaaaaggacggcacatcaatacaccgcagcatgata
aaacgattcaaccaacactccataatggtgctcaaagctagtcataaaacaaactccagt
aatagtagtagtaataacagtagtaaaacaacaaataacaacaaagtcgaaaacggtatg
aaagaaacaaatggtgtcgaaaagaggccgacaagcgataaagatccaacggaacccgtt
gataaaaaaaagagaataatggaaaagttacattatgaagatcttgatagtataagtagt
agacaggatgcgcaggagttgaaattgtcaaaggtagaaagatatttattaggtcctgcc
tcgcaagtaagccagtcaagtacaagcacaaacaacccacccccattatcagctctagcg
tctgtctgtcaggcgtggtcgagcgggcagcagtgccagcgccccgtgcgggtgagcgcg
gccgccgccgtgggcgcgctgggcgagctcagccccggcggggcgctcatgcggcagcac
cacgccgcctgcatggcgcaactagttcctcaagacgttaaaagcgaactaaaccgttta
tacctttcgggcggcgaactgctgcgggagctgtggagatgcttcccgcagccaggagcc
agcaacgacgccgaggacacgcctgcgagggcggagaagttctacgaggctttgcttagg
tttaggaatgttaaattgaggccctttgaggaaaaaatgctacgcgacctcaccccacta
gcgacatctctcaccagacacatgaaccaaatgatcgacacagcttgcgcgaagtacgcg
ctgtggcaacagagacaggccaagttgcggtag
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