Nymphalis io (European peacock): 126776810
Help
Entry
126776810 CDS
T08495
Name
(RefSeq) transcription factor Sox-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
niq
Nymphalis io (European peacock)
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
niq03000
]
126776810
Transcription factors [BR:
niq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126776810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
126776810
NCBI-ProteinID:
XP_050355563
EnsemblRapid:
ENSIIOG00005000681
LinkDB
All DBs
Position
21:4179584..4668016
Genome browser
AA seq
537 aa
AA seq
DB search
MSSKRKSPPSKLQEGAADTEKSEAGPANLDFSDNHESDDNEHQNFYKFSPSSSPRTSISE
EETYEDEQPSKKQRFDQSLDMTNNLLVPSSFLSLHQVNDLQTRRRGSSECSSPGAEAKVL
GLCNNNNSLLNHNSALSLAPPHKRSMDDVLKRLTSKMNNSTIKEEKRPTPSTTPVKHNDR
RGVLDAAALQAFAGESVLEKERQLSEMILQLQMVREQLLAQQEHTKNINTVSAEMELQRL
QQEHLRRQEMVRRGHLYPGPPLGLLPLLEQMRPQPPPQSNVVPTSTWPATAQLAQLTASA
RSPPPQDPDAPLNLSKQRSPSPAQPMMLQRFVPYPPMEDNSPYNMKKDDDYNTGCNTSSW
AQSPPEEAEKAKLIRQPKRDEAGKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKI
LGARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKNLM
RTRRQEMRQLWCRDGGSELNFLPSLSSPGPSNSSPPPNGGNYMNPGFSPPLSPREED
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctaaaagaaaatcgccaccctcgaaattgcaagaaggagccgctgacacagag
aaatcggaagctggacctgccaacctggatttctccgacaaccacgagtcagacgacaac
gaacatcagaatttctacaaattctcaccgagctcctcacctagaacctcaataagtgaa
gaggaaacgtacgaagacgaacagccgagcaagaagcaacgattcgaccaatcattagac
atgacaaataaccttctagtcccatcgtcctttctaagtctccaccaggtcaacgacctt
caaactagaagacgtggctcctcagaatgcagcagccccggtgctgaagcgaaagttttg
gggctgtgtaacaacaacaattcattgttgaatcacaacagcgcgttgtcgctcgcacct
ccgcataagcggtctatggatgatgtgttgaagagattaacgtcgaagatgaataacagt
acgattaaggaagaaaagaggcccacgccctctactacgccagttaagcacaatgatcga
cgaggcgtgctagacgcggcggcgctacaggcattcgctggagaaagcgttttggaaaaa
gaacgacagttgtcggagatgatcttgcagctccagatggtgagagaacagctactggct
caacaagaacacactaagaatataaacaccgtatcagcggaaatggaactgcaaagactt
caacaggagcacctcaggagacaagaaatggtgaggcgtggacacttatacccaggccct
ccgcttggccttctcccgttattagagcagatgcgaccgcagccaccaccacaatcgaat
gtggtgccaacatcaacttggccagcgacagctcaactagcccaactgacagcaagcgcg
cgttctcctccacctcaagatccggatgcaccattaaacctcagcaagcaacgttcaccg
tcgcctgcgcagcccatgatgcttcaaagattcgtgccctacccgccaatggaagacaac
agtccttataatatgaagaaagatgatgattataacactggctgcaatacgtcttcttgg
gctcagtctcctccagaagaggcagagaaagcaaagctgattcgtcaaccaaaacgcgat
gaagccggcaaaccccatatcaagagacccatgaacgcattcatggtatgggcaaaagac
gaacgccgtaagatccttaaagcctgcccggatatgcataactcgaatatatcaaagatt
ctcggtgcgagatggaaggccatgtccaacgcggagaagcagccatactacgaagaacaa
tcgagactttctaagttgcacatggaaaaacaccctgattataggtaccgaccaagaccg
aagcgaacatgcatagttgatggaaagaagatgcgaatatcagaatataagaatttgatg
cgcacgcgcagacaggagatgaggcagctgtggtgcagagatggggggagcgaactaaac
tttcttccttctttatcaagccccggaccatctaactcgtcaccaccacccaatggaggg
aattacatgaacccagggttctctcccccactgtctcctagggaggaagattga
DBGET
integrated database retrieval system
