KEGG   Nymphalis io (European peacock): 126778238
Entry
126778238         CDS       T08495                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
niq  Nymphalis io (European peacock)
Pathway
niq03013  Nucleocytoplasmic transport
niq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:niq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126778238
  09122 Translation
   03013 Nucleocytoplasmic transport
    126778238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:niq03019]
    126778238
   03041 Spliceosome [BR:niq03041]
    126778238
Messenger RNA biogenesis [BR:niq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     126778238
Spliceosome [BR:niq03041]
 Complex C
  Other components
   EJC/TREX
    126778238
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    126778238
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WDR55 ANAPC4_WD40 WD40_Gbeta EIF3I Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 PAC11 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_HPS5 Tricorn_2nd DSE1_N WD40_RFWD3 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th NBCH_WD40 TRM82_WD Beta-prop_EIPR1 Beta-prop_ELP1_1st Beta-prop_WDR11_1st Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 PD40 CNH
Other DBs
NCBI-GeneID: 126778238
NCBI-ProteinID: XP_050357681
LinkDB
Position
25:complement(1866511..1870349)
AA seq 328 aa
MKDSKQTQTPIEDLAELRSYFASHNVVREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAI
FNLERNRLAQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAAAISTK
GENINIAWSPSGATIAVGNKEDLVSFIDARNYKVVVEEQFNFEVNEISWNSTSDLFFLTN
GLGCVHILTYPGLELQTVLKAHPGTCICIEHDPTGRYFATGSADALVSLWDVNELACLRV
FSRLEWPVRTLSFSFDGRLLASASEDHIIDIGDTETGEKVAEIPVQAATFTVAWHPSRYL
VAFACEDKEPPERKRDAGNLKLWGLSSS
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaaagattctaaacaaactcagacacctatagaagatttagcggaattacgaagttac
tttgcgagtcataatgttgtgcgggagtatatagcccatagctccaaagttcattctgta
ggctggtcttgcgacggtagaaaactagcttcaggttcttttgataaaagtgttgcgatt
ttcaacttggagagaaatagattagcacaagattttatattcaaaggccataccggctca
gttgatcagctttgttggcatgcctctcatcctgatttattaagtacggccagtggagac
aagtcagtacggatatgggatactcgatcacataaatgtgcagcagcaatttcaacaaaa
ggagaaaacataaatatagcatggtcgcccagcggagccactattgctgttgggaacaag
gaagaccttgtgtcttttattgatgctcgaaattataaagtggtagtagaggagcagttt
aattttgaagtaaatgaaatctcatggaacagcacctcagatctctttttcttgacaaat
ggattgggatgcgttcatatactcacctacccgggcttggagctgcagacggtgctaaag
gcgcaccccggcacgtgtatctgcatcgagcacgaccccacgggccggtacttcgccacg
ggctccgctgacgctctcgtgtccttgtgggatgtcaatgagcttgcctgtctcagagtc
ttctccagactggaatggccggtgcggactctatcattcagttttgacggaagactcctg
gcttcagcgagtgaagatcacattattgatattggtgatactgaaacaggagaaaaagta
gcagaaataccagtacaagccgccacattcacagtggcctggcatccttccagatactta
gtggcgttcgcttgtgaagacaaagagcccccggagaggaaacgggacgctggcaacctc
aagttatggggattgagcagtagttag

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