Nymphalis io (European peacock): 126779469
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Entry
126779469 CDS
T08495
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126779469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
niq03041
]
126779469
03009 Ribosome biogenesis [BR:
niq03009
]
126779469
Enzymes [BR:
niq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126779469
Spliceosome [BR:
niq03041
]
Complex A
U2 snRNP components
U2 related factors
126779469
Complex B
126779469
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
126779469
Ribosome biogenesis [BR:
niq03009
]
Eukaryotic type
90S particles
Helicases
126779469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
ABC_tran
AAA_25
T2SSE
AAA_7
Flavi_DEAD
TsaE
Motif
Other DBs
NCBI-GeneID:
126779469
NCBI-ProteinID:
XP_050359418
EnsemblRapid:
ENSIIOG00005006974
LinkDB
All DBs
Position
29:2700983..2806385
Genome browser
AA seq
735 aa
AA seq
DB search
MSKRRIEVMDPFIKKKREEKAAAAAKSGGSGETSDSVATLGTALPPTATSTPGINQYSGS
PHTPRYHELLRRRLGLPVWEYKNDFMRLLNTHQCVVLVGETGSGKTTQIPQWCVEFAAIT
AGKSHGVACTQPRRVAAMSVAQRVAEEMDVPLGQQVGYSIRFEDCSGPQTVLKYMTDGML
LREAMSDPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRTDLKLVIMSATLDAGKFQ
QYFDNAPLMNVPGRTHPVEIFYTPQPERDYLEAAIRTVIQIHICEEIAGDILLFLTGQEE
IEDACKRIKREIDNLGPEVGELKCIPLYSTLPPNLQQRIFEQAPPNRANGAIGRKVVVST
NIAETSLTIDGVVFVIDTGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKC
FRLYTEKAYKHEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE
LLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFV
RPNEARKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVR
QQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTVKDNQVVQL
HPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYELNNFPQCEARRQLE
LLQARLDSKAYQEGF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgaaggattgaagtgatggatccgtttattaagaaaaagagggaagagaaa
gccgcggccgcggcgaagtccggtggcagcggggagacgtcagactcggtcgccacactt
ggaactgcactccctccgacagctaccagtacgcctggtatcaaccagtattcaggctca
ccgcatactccacgataccacgaactcctgcgacgtcgactcggcctccccgtttgggaa
tacaaaaacgatttcatgagacttttgaacacgcaccagtgtgtcgtgttagttggtgaa
acgggatccggtaagacaactcaaataccgcaatggtgcgtggagttcgcggcgatcacg
gcggggaagtcccacggagttgcctgcacccaacccaggcgagtggccgcgatgtcagtc
gctcagagagtcgcggaggagatggacgtgccgctcggacaacaggtcggttacagcatt
cgtttcgaagactgctccgggccccagacggtactcaaatatatgacagatggtatgttg
ctgcgtgaggcgatgtcagatccgatgctggaacagtacagggtcatacttctcgacgag
gcccacgagaggacattggccacggatatcctcatgggggtactgaaggaggtgataaag
caaaggacggatttgaagctagtcattatgtccgcgacactagacgctggaaagttccag
cagtactttgacaatgcccccctgatgaacgtcccgggtaggacacatccggtggaaatc
ttttacaccccccaaccggagagggactacctggaggcggcgatacgaaccgtcattcaa
atccacatatgcgaggagatagccggtgatatactgctgttcctcaccggtcaggaggag
atcgaggacgcctgcaagcggatcaaacgtgaaattgacaacctgggaccggaagtcggc
gagctcaagtgtataccgctatactcgacgctgccgccgaaccttcagcaaaggatattc
gagcaggctcctccgaaccgggccaacggcgccatcggcaggaaggtggtcgtgtcgacg
aacatcgcggagacgtcgctgacgatagacggcgtggtgttcgtgatagacacgggcttc
tcgaagcagaaggtgtacaacccgcggatccgcgtggagtcgctgctggtgtcgcccatc
agcaaagcgtcggcgcagcagcgcgccggtcgcgctggccgcacgagacccggaaagtgc
ttccgcctgtacaccgagaaggcctacaagcatgagatgcaagacaacacctaccccgag
attctgagatcaaacttaggatctgtagttttgcagttgaaaaagctgggtatcgacgac
ctcgtgcactttgacttcatggacccgcccgcgcccgagaccctgatgagggccttggag
ctcctcaactacctggcagcgctcgacgacgacggtaacctgacagacctcggcgccgtc
atggcggagttccccctcgacccccagctggcgaagatgttgatagcgagctgcaaccac
aactgttccaatgagatactatcaatcactgccatgctctctgttccacaatgcttcgtg
cgaccgaatgaggcccgcaaggcggctgacgaggcaaagatgcgcttcgcgcacattgac
ggtgaccacctcacgctactgaacgtgtatcacgctttcaagcaaaacatggaagacccc
cactggtgctacgataacttcatcaactacagatcacttaaatccggtgacaatgttaga
caacaactcagccggatcatggacagatttaacttgaaaaggacaagcacagagttcaca
agcaaagattattatattaatataaggaaagcactcgtcaatggtttctttatgcaggtc
gctcacttggaacgtacgggacactatttaacagttaaggataaccaagtggtccagctt
catccgtcaacctgcctcgatcacaaaccggactgggtcatatacaatgaatttgtactt
acaacaaaaaattacattcgtaccgtcacagatatcaaaccggaatggttgctgaagatt
gcaccgcagtactacgagttaaacaatttccctcagtgcgaggcacggagacagctggaa
cttctacaggcccgtctcgattccaaggcctaccaagagggattctaa
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