Nymphalis io (European peacock): 126779472
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Entry
126779472 CDS
T08495
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
niq
Nymphalis io (European peacock)
Pathway
niq04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126779472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
niq04121
]
126779472
Enzymes [BR:
niq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126779472
Ubiquitin system [BR:
niq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126779472
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126779472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
EIF3I
zf-C3HC4_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_EML
zf-C3HC4
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
zf-RING_2
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
zf-RING_5
WD40_RFWD3
Beta-prop_HPS5
zf-RING_10
zf-C3HC4_3
zf-C3HC4_4
Beta-prop_IFT122_1st
Beta-prop_DCAF12
RING_XB3-XBAT31
Beta-prop_IFT140_1st
SlyX
TRAF3_RING
Sina_RING
DZR
WD40_like
Motif
Other DBs
NCBI-GeneID:
126779472
NCBI-ProteinID:
XP_050359424
LinkDB
All DBs
Position
29:2975945..2983838
Genome browser
AA seq
725 aa
AA seq
DB search
MSLGSMSGAAASGAGSSVSALGGLGGSLEDKDCDLLCPVCFNLIDEAYVTRCGHSFCYAC
IAKSVELHRRCPKCGAALAGRDHYFPNFLLNELVARRRLRTRPQVVSGPVSTSPGPDAER
LRALLASEARHLALPDVEGMLDVLTRRKRLLEAESAAAHHKLLYEFLSQLLRHRTHQLDQ
LAREAALVKKDMEHVAGVLHELRAGAAELARAPPPGEPPAACEPARLGELGDAAPRSPPA
EEEESFASAGGGGSGDALSARWRRLAAHFDDFVQCYFAHRADELYFPGSGSATPAVGLPA
TSGPSPGPPTSLSQPLGAGGAADADPVPQQTSAPETRASSAAGDQRAPEGDPQPPSAAPS
TVGAPTPASAPGAPGAGGEGGFGGLEAFREDLAAFTRYRALRPLATLSYCSDAINYSTIV
STIEFDKDDEFFAIAGVTKRIKVFEFEAVVRDAVDVHYPCAEMQCSHKISCVSWNAYHKH
VLASSDYEGTVSVWDAHAGVRTRSLQEHDKRCWSVHFNRADVRLLASGSDDARVKLWSLN
AERSVATLEAKFNVCCVRFNPRSSCHLAFGSADHCVHYYDLRAPRAPLAVFRDHRKAVSY
VKFVDARTLVSASTDSQLKLWRVESPRCVRSFTGHANEKNFVGLATDGRYVACGSENNAL
YVYYAGLSRPLLAYRFDAVRGFLERERRDEEPAEFVSAVCWRRAPDRPALLAANSQGTIK
VLELV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgggcagtatgtcgggcgccgcggcgagcggagccggcagctcggtgtccgca
ctaggcgggctcggcggctctctggaggacaaggactgcgacctgctctgccccgtgtgc
ttcaacctcatagacgaggcgtacgtgacgcgttgcggtcactccttctgctacgcctgc
atcgccaagtccgtggaactccatcgccgctgtccgaagtgcggcgccgcgctggccggt
cgcgatcattacttcccgaactttcttctcaacgaattagtagcgcggagacgactacgg
acgagacctcaagtagtcagcgggcccgtgtcgacgtctccgggtccggatgcggagcgt
cttcgagctctgctagcctccgaggccagacacctagcgctgcccgacgtggaaggaatg
ctcgacgtgctgacgagacggaaacgcctcttggaagcggagtcggctgctgctcatcac
aaacttctgtacgagttcctgtcgcagctgctgcgacacagaacgcatcagctagaccag
ttggcgcgagaagcggcacttgtaaaaaaggacatggagcacgtggcgggcgtgctgcac
gagctgcgcgcgggcgcggcggagctggcgcgcgcgccgccgcccggcgagccgcccgcc
gcctgcgagcccgcgcgcctcggcgagctgggggacgccgcgccgaggagcccgcccgca
gaggaggaggagagcttcgcgagtgcggggggtgggggctcgggggacgccctgtcggcg
cgctggaggcggctcgccgcgcacttcgacgacttcgtgcagtgttactttgctcatcgt
gcagacgaactttatttccctggatcaggctctgccacgcccgccgtcggcctcccggct
acctccgggccgtctcccggcccccccacgtcactctcgcagcccctcggcgccggcggc
gccgccgacgcggaccccgtgccgcagcagacctccgcgcccgagacgagggcctccagc
gccgcaggcgaccagcgcgcgcccgagggggacccgcagccgcccagcgccgcaccgagc
acagtgggggccccgacgccggcgagcgcgccgggggccccgggcgccggcggcgagggg
ggcttcggcggcctcgaggcgttccgcgaggacttggccgccttcacccgctaccgcgcg
ctgcggccgctcgccacgctatcgtactgcagcgacgccatcaactactccaccatcgtg
tccaccatcgagttcgacaaggacgacgagttcttcgccatcgcgggcgtgacgaagcgc
atcaaggtgttcgagttcgaggccgtggtgcgcgacgccgtggacgtgcactacccgtgc
gccgagatgcagtgctcgcacaagatctcgtgcgtgtcgtggaacgcgtaccacaagcac
gtgctggcgtcgtcggactacgaaggcacggtgagcgtgtgggacgcgcacgccggcgtg
cggacgcgctcgctgcaggagcacgacaagcgctgctggtccgtgcacttcaaccgcgcc
gacgtgcgcctgctggcctcgggctccgacgacgcgcgcgtcaagctgtggtcgctcaac
gccgagcgctccgtggccacgctggaggccaagttcaacgtgtgctgcgtgcgcttcaac
ccgcgctcgtcgtgccacctggccttcggctcggccgaccactgcgtgcactactacgac
ctgcgcgctccgcgagccccgctggccgtgttccgcgaccaccgcaaggccgtgtcctac
gtcaagttcgtggacgcccgcacgctggtgtcggcgtcgaccgactcgcagctcaagctg
tggcgcgtggagtcgccgcgctgcgtgcgcagcttcacgggccacgccaacgagaagaac
ttcgtggggctggccacggacggccgctacgtggcgtgcggctcggagaacaacgcgctg
tacgtgtactacgcgggcctgtcgcgcccgctgctggcgtaccgcttcgacgccgtgcgg
ggcttcctggagcgggagcggcgcgacgaggagccggccgagttcgtgtcggccgtctgc
tggcgccgggcgccggaccggcccgcgctgctggccgccaacagccagggcaccatcaag
gtgctggagctcgtctag
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