KEGG   Nymphalis io (European peacock): 126779616
Entry
126779616         CDS       T08495                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
niq  Nymphalis io (European peacock)
Pathway
niq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:niq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    126779616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:niq03019]
    126779616
Messenger RNA biogenesis [BR:niq03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     126779616
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     126779616
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N ECR1_N_2 RRP40_S1
Other DBs
NCBI-GeneID: 126779616
NCBI-ProteinID: XP_050359723
LinkDB
Position
2:4299167..4301734
AA seq 299 aa
MNGHVTIRLASERVNHCVASSNELPRFYTPGEVISGMQDFMRGHGTYVEDDCIKSSVAGV
MQKVNKLICVRPLKSRYVGEIGDVVVGRVLEVQQKRWKIETNSRLDSILQLSSVNLPGGE
LRRRSAEDEQMMRKHLQEGDLISAEVQSVFSDGSLSLHTRSLKYGKLSQGVLMKVFPSLI
KRRKNHFHNLPCGIAIIIGNNGFIWMSPIQQNIIFAENNEDIQNYEHQPVHRSDREIMAR
LKNCVSALVSSKMMLDDSSIMFAYEESLRYDDVKELLDPEVMLDIAFLTQHRLNSIMEE
NT seq 900 nt   +upstreamnt  +downstreamnt
atgaatgggcatgttacgattagattagcctctgaaagagttaatcattgtgtggcatca
agtaatgaattaccaaggttttatacaccgggggaggttataagtggcatgcaagacttt
atgcgtggccatgggacatacgtagaagatgactgtattaaatcatcagttgctggtgta
atgcaaaaagtaaataagttgatttgtgtgcggccattgaaaagtagatatgtcggtgaa
ataggcgatgttgtggttgggagagttttagaagttcaacaaaagagatggaaaatagaa
accaactctcgcctggattccattttacaattgtcttcagttaatttacctggaggagaa
ttgcgccgcagatctgctgaagatgagcaaatgatgaggaagcatttacaagaaggtgat
ttaattagtgcagaagtgcagagtgtattttctgatggctctttgtcgttacatacaagg
agcttaaagtatggcaagctatcccaaggagtgttaatgaaagtttttccatcattgatc
aaacggcgaaaaaatcactttcataatttaccttgcggtattgcaattatcattggtaat
aatggcttcatatggatgagcccaatacaacaaaatattatatttgcagaaaataatgaa
gacattcaaaactacgaacatcagcctgtacatagatcagatagagaaataatggcaaga
ttgaaaaactgtgtgtcagcattggtatcttcaaaaatgatgttggatgactcaagtata
atgtttgcttatgaagaaagcctgaggtatgatgatgtaaaggaactactggaccctgaa
gttatgcttgacattgcattcttaacacagcacagattaaatagtattatggaagagtaa

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