Nymphalis io (European peacock): 126781078
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Entry
126781078 CDS
T08495
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03020
RNA polymerase
niq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126781078
09124 Replication and repair
03420 Nucleotide excision repair
126781078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niq03021
]
126781078
03400 DNA repair and recombination proteins [BR:
niq03400
]
126781078
Enzymes [BR:
niq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126781078
Transcription machinery [BR:
niq03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126781078
DNA repair and recombination proteins [BR:
niq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126781078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
126781078
NCBI-ProteinID:
XP_050361838
LinkDB
All DBs
Position
3:complement(10727917..10731721)
Genome browser
AA seq
1176 aa
AA seq
DB search
MYDTEDDQYEEEEVEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPPIELQAEAQHSSGEIETPPKYHLKFDQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKENEDPIETQHQKTFIGKIPIMLRSTYCLLSNLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMQGGKYAYKTEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRIVAIVPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALSFIGARGARPGVTKERRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYAQ
KFIDKGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGALLLKKKHIDQLKERDYNNYGWQNLVASG
VVEYIDTLEEETVMIAMSPDDLAQVKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELEGTTKRYSKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISSLLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVVS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacacggaggacgatcagtatgaagaggaagaagtcgaagaaatctcctctgag
ctttggcaagaagcctgttggatagtaatcaacgcttattttgatgaaaaaggcttggtt
aggcagcaactagatagttttgacgagtttattcaaatgtccgttcagcgcatagttgaa
gattcacccccaatagaacttcaagctgaagctcaacattcttctggtgaaattgaaacg
cctccaaaatatcacttaaagtttgaccaaatttatctttctaagccaactcattgggaa
aaagatggtgccccgtctcctatgatgcctaatgaagcgcggttgcgaaatttaacttat
tctgctcctttatatgttgacattacaaaaactattgttaaagaaaatgaagatccaatt
gaaactcaacatcaaaaaacatttattggaaaaattcctattatgctaagatcaacatac
tgtttgctaagcaatttgacggatcgtgatttaactgaattgaacgaatgcccattagat
cctggtggctattttattatcaatggatctgaaaaagttttaattgcccaagaaaaaatg
gccaccaatactgtatatgtgtttagtatgcaaggtggcaagtatgcatataaaactgaa
attcgttcttgtcttgaacatagttctagaccaacgtcaactctttgggtcaatatgatg
gctagaggtggccaaagtattaaaaaatcagctattggacaaagaattgttgcaattgta
ccatatattaaacaagaaataccaattatgattgtgtttagagctcttggttttgttgct
gatagagatattttggagcatatcatttacgattttgatgatccagaaatgatggaaatg
gtaaagccttcattagatgaggcttttgttatacaagaacagaatgtcgccctgagcttt
attggtgcaagaggagctcgacctggagtcactaaagaaaggcgtattaaatatgcaaga
gaaattttacaaaaagaaatgttaccacatgttggagtgtcagatttctgtgaaactaaa
aaagcttatttcctggggtatatggtccacagactactgttagctgcgttaggtcgacgt
gaacttgatgacagagatcattatggaaataaaagacttgacttggctggaccgttatta
gcttttctgtttagaggactgttcaaaaatttgttgaaagaagtaagaatgtatgcgcag
aaatttattgacaaaggaaaagattttaatttggaattagctattaaaacaaaaataata
actgatggcttaagatattccttggccacaggtaattggggtgatcaaaagaaagctcat
caagcaagagctggtgtgtctcaagtattaaacagattaacattcgcttcaactttatca
catttgcgccgtgtaaattcacccataggccgtgatggtaaattagcaaagcctcgccaa
ttgcataatactttatggggcatgatttgtcctgcagaaacacctgaaggagctgctgta
ggtttggtaaaaaatctggctttaatggcctatatttcagttggtagtcagccatctcca
atcttagagttcttggaagagtggtctatggaaaatttagaagaaatagcaccttcagcc
atagcggatgcaacaaaaatatttgtaaatggttgttgggtaggaattcacagagatcct
gagcaactcatggccactttacgtaagttaagacgtcaaatggacattattgtctcagaa
gttagcatgatccgagatattcgagatagagaaataagaatttacacagatgctggcaga
atttgtcggccacttttaattgtggaaaatggagctctgctgctaaagaagaaacatatt
gatcaactcaaggaaagagattacaataattatggatggcaaaatttggttgcaagtggt
gttgtagagtatattgatactctggaagaagaaactgtgatgattgctatgagccctgat
gacctggcacaagtcaaagagtatgcatactgtacaacatatactcactgtgaaattcat
cctgctatgattttgggtgtttgtgcttctattattccattccctgatcataatcaaagt
cctagaaatacatatcaaagtgctatgggtaagcaagctatgggagtatacattacaaac
ttccatgtcagaatggacacacttgctcatgtactgtattacccacacaaacctttagtt
acaacaagatctatggagtatctgcgttttagagaattgcctgctggaattaattcaatt
gttgctattttatgctacactggctataatcaagaggacagtgttatcttaaatgcttca
gctgtagaaagaggctttttcagatctgtgttctatcgctcctataaggattcggaatct
aaaagaattggtgatcaagaagagcaatttgaaaaaccaacgagacaaacttgtcagggc
atgagaaatgcactttatgataaattagacgatgatggtattattgcccctggtataaga
gtatctggagatgatgttgttattggcaaaacaataacactcccagagaatgatgatgaa
ctggagggtacaaccaaacgctacagcaaacgagatgcctcgacattcttgcgtaatagt
gaaactggtattgttgatcaagttatgttaacattaaacagtgaagggtataagttttgc
aaaattcgggtacgatcagtacgtataccgcaaataggcgacaaattcgcgtcccgtcac
ggacaaaaaggaacttgtggaattcagtatagacaagaagatatgccgttcacttgtgag
ggtcttactcccgatatcatcattaatcctcacgctatcccatctcgtatgacaattggt
cacttgattgaatgtattcaaggaaaagtatcgtcaaacaaaggagaaattggcgatgct
acaccatttaatgatgccgttaatgtacaaaaaatttcatctttgttgcaagagtatgga
tatcatttacgtggcaatgaagttatgtacaacggtcacacaggtcgaaaaattaacgcc
caagtattcttgggtcctacttattatcaacgtctcaaacacatggttgacgacaaaatt
cattcgagagcaagaggaccagtacaaattttagtaagacaacctatggaaggaagagct
cgtgatggagggttgcgttttggagaaatggaacgtgattgtcagattgcccatggtgct
gcgcaattcttgagggaacgtctttttgaagtatccgatccatatcgcatacacgtatgc
aatttctgcggacttatagcaatagcaaatctacgaaataatacttttgaatgcaaagga
tgcaaaaacaagacccagatatctcaagttcgattaccatatgctgctaaattattgttc
caagaactaatgtctatgaatattgcacccaggcttatggttgttagttaa
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