Candidatus Nitrosopumilus sediminis: NSED_00010
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Entry
NSED_00010 CDS
T02303
Name
(GenBank) glycyl-tRNA synthetase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NSED_00010
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nir01007
]
NSED_00010
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nir03016
]
NSED_00010
03029 Mitochondrial biogenesis [BR:
nir03029
]
NSED_00010
Enzymes [BR:
nir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
NSED_00010
Amino acid related enzymes [BR:
nir01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
NSED_00010
Transfer RNA biogenesis [BR:
nir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NSED_00010
Mitochondrial biogenesis [BR:
nir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NSED_00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Thr_dehydrat_C
zf-RRPl_C4
zinc_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
AFS81818
UniProt:
K0B6S3
LinkDB
All DBs
Position
complement(2993..4450)
Genome browser
AA seq
485 aa
AA seq
DB search
MDYESVMKLALERGFYFPSCEVYADAQAGFWEYGPSGVSLKNKFLELWRRELIRRDGMLE
IDGSQIMSKSVFEASGHLGNFADPIIKCTKCNSTYRADRTIAELVQIEIPESADLEEFDR
AISENNIKCPKCKGDFDKAKNFNMMFKVGIGPEEEEAYLRPETCQSIFVDFPRLYKTMRG
KLPLGIAQVGKSFRNEIAPRQSLLRLREFYQAEIEVFCNPNKLFEIEKFSEIQDVIIRVQ
TDSDPVSMTCKEAVESGVVPNKFVAYYLGILTEFYEKTGIDITKSRFRKLGDKEKAFYAE
VAFDFEVETTIGWLELVACNYRSDYDLSSHEKKSKQKFEIMDEDEKVLPHVFEISMGIDR
SLYTILEHSLKDDKEHERIVLSLKPYLAPVHVGILSLVKKDGLKEKTDEIYLQIKRRYDV
FLDHSGAIGRRYRRLDEVGSPFAITIDHQTLEDNTVTIRKRDSMEQNRINISELDSILQS
STAYP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggattatgaatcagtaatgaaactagcacttgagcgtggattttactttcctagctgt
gaagtttatgctgatgcacaggcgggattttgggaatatggaccatctggagttagctta
aaaaataaatttcttgaattgtggagaagggaattaatccgaagagatggaatgttggag
attgatggatctcagataatgtcaaaatcagtttttgaagcatcaggtcatttaggaaat
tttgctgatccaataataaaatgtacaaaatgtaattcaacatatagagcagatagaaca
attgcagaacttgtacaaatagaaattcctgagagtgcagatttggaagagtttgataga
gctatttctgaaaataatatcaaatgtccaaaatgtaagggggattttgataaagcaaag
aatttcaatatgatgttcaaagtcggtattggtccggaagaagaagaagcatatctgcga
cctgagacatgccaatcaatttttgtagattttcccagactatacaagactatgaggggt
aaacttcctttagggattgcccaagtaggaaagagtttcagaaatgaaattgcacctaga
caaagcctgcttcgattaagggagttttatcaggcagaaattgaagtattttgtaatcca
aacaagctatttgagattgaaaagttttcagagattcaggacgtcattatcagagttcaa
acagattcggatccagtatccatgacatgcaaagaagcagtagaatcaggagttgttcca
aacaagtttgttgcatattatctgggaattttaacagagttttatgagaaaacaggaatt
gatatcacaaaaagtagatttagaaaattaggagataaggaaaaggcattctatgccgag
gttgcatttgattttgaagtggaaactacaattggatggctagaacttgttgcatgtaac
tatagatctgactatgatttgtccagtcatgaaaaaaagagtaagcagaaatttgagata
atggatgaagatgagaaagttttaccacatgtatttgagatatcaatgggaattgataga
agcctctatacaattttggagcacagcctcaaagatgataaagaacatgaaagaattgta
ctatctctaaagccatatcttgctcctgtacatgtaggaattttgtcactggtaaaaaaa
gatggcctcaaagaaaaaactgacgagatttaccttcaaattaaaagaagatacgatgta
ttcttggatcattctggtgccattggtaggcgatacagaagattggatgaagttggttcc
ccctttgccattactattgatcatcaaactttagaagataatacagtaacaattagaaaa
agagactctatggaacaaaatagaattaacatttcagaattggattctatattacaaagt
tcaactgcatatccctga
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