Candidatus Nitrosopumilus sediminis: NSED_00130
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Entry
NSED_00130 CDS
T02303
Name
(GenBank) recombinase A
KO
K04482
DNA repair protein RAD51
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir03440
Homologous recombination
nir03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NSED_00130
03460 Fanconi anemia pathway
NSED_00130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nir04131
]
NSED_00130
04121 Ubiquitin system [BR:
nir04121
]
NSED_00130
03400 DNA repair and recombination proteins [BR:
nir03400
]
NSED_00130
Membrane trafficking [BR:
nir04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
NSED_00130
Ubiquitin system [BR:
nir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
NSED_00130
DNA repair and recombination proteins [BR:
nir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
NSED_00130
RecA family proteins
NSED_00130
FA (Fanconi anemia) pathway
Other FA pathway factors
NSED_00130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
ATPase
RecA
AAA_24
Zot
AAA_25
ATPase_2
OST48_N
SLFN-g3_helicase
PIF1
CbiA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AFS81842
UniProt:
K0B9V7
LinkDB
All DBs
Position
26226..26885
Genome browser
AA seq
219 aa
AA seq
DB search
MISTGLQKLDGFLSGGIPDSVIVDIFGGGGTGKTLLLLQLLINSIKNGGNILYLDTSGGF
RPERILEIQKESEIDIDLLEKITVSRITNTSEQIESIKDIEKNDYSLIVIDNITDLFSYE
YQNDESIFEKNSLFMKYMHKLSKFAITKKIPIVVSNMIRNIEGKEVENMQSAIDPFTHIK
IHLFKNSSKFNGEIYWALKKETFSYTITKIGLVDRTEDF
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgatttctactggcttacaaaaattagacggattcttgtctggaggaattcctgatagt
gtgattgtagatatttttggtggaggtggaactggaaaaactctactattgttacaatta
ttgattaattcaattaaaaatggtggcaatattttgtatctagatacatcaggtggattt
agacctgaaaggatcttagaaattcaaaaagaatcagaaatagatattgacttacttgaa
aaaataaccgtatctcgaattactaatacttcagaacaaatcgaatccatcaaagacatt
gaaaaaaatgattattcattaatagtaattgataatattactgatttattttcttatgag
taccaaaatgatgaatctatttttgaaaaaaattcattatttatgaaatacatgcataaa
ttatcaaaatttgcaataacaaaaaaaattccaattgttgtcagtaatatgattagaaat
atcgaaggtaaagaagttgaaaatatgcaaagtgcaattgatccttttacacatatcaaa
attcatcttttcaagaattcatcaaaatttaatggtgaaatctattgggcattaaaaaaa
gaaactttttcttacactattacaaaaattggacttgttgatcgtactgaagatttttaa
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