Candidatus Nitrosopumilus sediminis: NSED_00145
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Entry
NSED_00145 CDS
T02303
Name
(GenBank) OB-fold tRNA/helicase-type nucleic acid binding-protein
Organism
nir
Candidatus Nitrosopumilus sediminis
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GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
SHLD2_OB1
DUF3460
Motif
Other DBs
NCBI-ProteinID:
AFS81843
UniProt:
K0B6W0
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Position
complement(29729..31126)
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AA seq
465 aa
AA seq
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MSEFENLINKFLEQKPELTKEQLEELIKQKKAKIGAGYLTDQGALFLIASDYGITLSEPQ
KTEISLKDLYAGAKEISLETRVLNLSPAKQFSRKDGSPFYLRTMTVYDTNSTASVKLWDE
KANLPGIENLKPGDLIKIIKAYVKSDLDGSPTINIGSGSNIETTDTKSEIPTIDTITKDV
SETQEGQKDLVVSGTIDGVISGMEFTNSRGMPGKALRMRLKGKDGSTMRVVLWGKDESSI
PNMISQSAKVRLLGVRVKSGNQGLEIHGNDATIIEIEGGKEAEPVITRILSMSPTENGKN
LILAVDNKKNLFNISDFSNSTSICVEGDVIECMPSKVYGNSITLDENSFVRKLDNDESIP
SLSQLRTKINEIKADGNYCIEAIVLKVPERREVQTKSGESIALSEMFVEDDTGQIWVKGW
RNQARIIDKCELGEIISITGLNAKAGLEGRIELFVTPFSKITKKN
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagaatttgaaaatcttattaataaatttctagaacaaaaaccagaattaactaaa
gagcaacttgaagaactgattaaacagaaaaaagcaaaaattggtgcaggatatttgact
gatcaaggtgcgttatttttaattgcttcagactatggaattacattatctgagccacaa
aaaacagaaattagtttaaaggatctatatgcaggtgcaaaagaaatctcattagaaacg
agagttttgaatctctcacctgcaaaacaattttctagaaaagatggctctccattttat
cttcgaacaatgacagtttatgatacaaattctacagctagtgtaaaattatgggatgaa
aaagcaaatcttccaggaattgaaaatctaaaaccaggagatttaattaaaattatcaag
gcttatgttaaatcagatcttgatggctctccaaccataaacattggttctggatcaaac
atagaaactacagatacaaaaagtgaaattcccactatagataccatcacaaaagatgta
agcgaaactcaagaagggcaaaaagatttggtcgtttcaggaacaattgatggtgtaatt
agtggaatggagtttacaaattctcgtggcatgcctggaaaagcactaagaatgagatta
aaaggaaaagatggaagtactatgagagtagtgttatggggtaaagatgaatcatctata
ccaaatatgatttcacagtcagccaaagtaaggttactaggtgtcagagtaaaatcagga
aaccaaggattagaaattcatggaaatgatgcaacaattattgaaattgaaggaggcaaa
gaagcagaaccagtaattaccagaattctatccatgtcacccacagaaaacggtaaaaat
ctaattttggctgttgacaataaaaagaatttgtttaacattagtgatttttcaaactca
actagtatctgtgtggaaggagatgtaatagagtgcatgccatcaaaagtttatggaaat
tcaatcaccttagatgaaaattcttttgttagaaaactagataatgatgaatcaatacct
tcattatctcaactcagaacaaaaattaatgaaattaaagctgatggaaattattgtatt
gaagcaattgtattgaaagttcctgaaaggcgtgaagttcaaacaaaatcaggagaatcg
attgcactttcagaaatgtttgttgaagatgatacagggcaaatttgggttaaaggttgg
aggaatcaagcaagaataattgacaaatgcgaattaggagaaatcatttccattacaggg
ctaaatgcaaaagctggactagaaggtagaatagaattatttgttactccattctctaaa
attacaaagaagaactaa
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