Candidatus Nitrosopumilus sediminis: NSED_00270
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Entry
NSED_00270 CDS
T02303
Name
(GenBank) transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
nir
Candidatus Nitrosopumilus sediminis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nir03000
]
NSED_00270
Transcription factors [BR:
nir03000
]
Prokaryotic type
Helix-turn-helix
Other families
NSED_00270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
HTH_IclR
Regulator_TrmB
HTH_27
MarR_2
HTH_24
Penicillinase_R
MarR
HTH_9
PLDc_2
PadR
PheRS_DBD3
Motif
Other DBs
NCBI-ProteinID:
AFS81866
UniProt:
K0BBZ6
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All DBs
Position
complement(52332..53099)
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AA seq
255 aa
AA seq
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MSISDKTRKALEKIGLTSYEIRTFSALLKSGELTASDLSQKSGVPYSKIYEVLGTLEEKG
WIGSDDSRPTKYFAKSPSTGLETTKQKMETDFSQNQNVILNELVPLYEKSGTSERPDIWV
LSGAVNIAAKILEMVETCRNEVMIALPEAGVDLVKQALPKLRSLHDKGVDITILTSDKMD
KESIKAIKRVATVTIKKGLFGGGIISDKRYVVILLGPEIGGVNSSEVVAIWADHAGLAGF
ARQYFEYLLKDSKKV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatcagataaaacacgaaaggcattagaaaagattggtcttaccagttatgag
attagaacattttcagcattgctcaaatcaggagaactaacagcatctgatcttagtcaa
aaatcaggagtgccatactcaaaaatttacgaagtgctaggaacattggaagaaaaaggt
tggattggttcagatgactcaagaccaacaaaatattttgcaaagtcaccatctacaggt
ttggaaactacaaaacaaaaaatggaaactgatttttcacagaatcaaaatgttatctta
aatgaattagtaccattgtatgagaaaagtggaactagtgaaagaccagatatttgggta
ctatcaggtgcagtaaacattgcagctaaaattttagaaatggtagagacgtgtaggaat
gaagtaatgattgcattacctgaagctggagtagatttagtgaaacaagcattaccaaaa
ttaagatcacttcatgacaaaggagtagacattacaattctaacatcagataagatggat
aaagaatcaattaaagcaatcaaaagagttgctactgtaacaatcaagaaggggctcttt
ggaggaggtataatttcagataaaagatatgtcgttattctattaggtccagaaatagga
ggagtaaattcttcagaggttgttgcaatttgggcagatcatgcaggattggcaggattt
gcacgtcaatactttgaatatttattaaaagattcaaagaaggtatga
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