Candidatus Nitrosopumilus sediminis: NSED_00325
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Entry
NSED_00325 CDS
T02303
Name
(GenBank) aIF-2BI family translation initiation factor
KO
K08963
methylthioribose-1-phosphate isomerase [EC:
5.3.1.23
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00270
Cysteine and methionine metabolism
nir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NSED_00325
Enzymes [BR:
nir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.23 S-methyl-5-thioribose-1-phosphate isomerase
NSED_00325
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Motif
Pfam:
IF-2B
UBA_9
Serine_rich
Motif
Other DBs
NCBI-ProteinID:
AFS81877
UniProt:
K0BA06
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Position
62290..63351
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AA seq
353 aa
AA seq
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MDDKTIIDSSLRTVEWKDNKVIMIDQTQLPNELVFVEYDDFNQVANAIKTLIVRGAPAIG
VSGAFGLALASLQSKATTKEELLSDLKNARKILFATRPTAVNLGWGLEKIMNIAKTGETV
EQIKDLVISTAKKMADEDIEINKAMGKNGSVLFDDNDTIMTHCNAGALATVAYGTALGVI
RAARESGKNVKVIATETRPIQQGSRLTAFELKHDGFDVSLVPDTAVGYSMANGLVNKVVV
GADRIVKTGHVFNKIGTYQVATMAKQHGIPFYVAAPLSTIDLKTKAEDVIIEMRNGTEVT
GIGEKKTAPDDIGVINPAFDMTPPELISGIITEKGVATAPYEESIPKLFEANN
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaaaccataatagattcatcacttcgaacagtagaatggaaagacaacaaa
gtgattatgattgaccagacccaattaccgaatgaactagtatttgtagaatatgacgat
tttaaccaagttgcaaatgccatcaaaactttgatagtcagaggtgcacctgcaattggt
gtatctggtgcatttggtttagcattagcctctttacaaagcaaagcaacaacaaaagaa
gaattactatctgatttgaagaatgcaagaaaaattctctttgcaacaagacccactgca
gtaaatctgggatggggattggaaaaaattatgaatatcgctaaaactggtgaaacagtt
gaacaaattaaagatctagtaatctctactgctaaaaaaatggcagatgaagatatagaa
ataaacaaagctatgggaaagaatggttctgttttatttgatgataatgatacaataatg
actcactgcaatgctggtgctctagctactgttgcatatggaacagcattaggtgtaatt
agagcagccagagaaagtggaaaaaatgtcaaggttatagcaactgagaccagaccgatt
caacaaggatcacgattaacagcatttgagttaaaacatgatggatttgatgttagtttg
gttcctgacactgcagtaggatattcgatggcaaatggattagtaaacaaagttgtagtc
ggagctgatagaattgtaaagacaggccatgtctttaacaaaattggcacatatcaggta
gcaacaatggccaaacaacacggaattccattttatgttgcagccccattatcaacaatt
gatctaaaaacaaaggctgaagatgtcattattgaaatgcgtaatgggacagaagttaca
ggaattggtgaaaaaaaaacagcccccgatgatattggagttattaatcctgcatttgat
atgactcccccagaattaatttctggaataattactgaaaaaggtgtggctacagcccct
tatgaggaatcaatcccaaaattatttgaagctaataattag
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