Candidatus Nitrosopumilus sediminis: NSED_01190
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Entry
NSED_01190 CDS
T02303
Name
(GenBank) succinate dehydrogenase or fumarate reductase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00020
Citrate cycle (TCA cycle)
nir00190
Oxidative phosphorylation
nir00650
Butanoate metabolism
nir00720
Other carbon fixation pathways
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
nir01120
Microbial metabolism in diverse environments
nir01200
Carbon metabolism
Module
nir_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NSED_01190
00650 Butanoate metabolism
NSED_01190
09102 Energy metabolism
00190 Oxidative phosphorylation
NSED_01190
00720 Other carbon fixation pathways
NSED_01190
Enzymes [BR:
nir01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NSED_01190
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
FAD_oxidored
Thi4
GIDA
DAO
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AFS82050
UniProt:
K0BAP6
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All DBs
Position
200253..201965
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AA seq
570 aa
AA seq
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MVDSLEFDLIICGSGLAGLRAAIAAAKKGPNLKIGIVSKVQVMRSHSVSAEGGTAAVLFE
DEGDTIESHVYDTVKGSDFLADQDVAERLCVEMPKEIHQLDHWGMPWSRRDDGRIDQRNF
GGYSFPRATYASDKVGFFEMQTLYDTCQKFENIEYLNEWFVTSIIHDGKRFMGVTAIELG
SGTFYTIKGKALIIATGGAGRLYSFSTYALSSTPDGLDMGLRAGMALKDMEFVQFHPTGI
LPSGILITEGARGEGGYLLNNKGERFMKTYAAGKMELAPRDIVSRSIMTEIQEGRGFKHE
TGVDCMKLDLRHLGDEKIKEKLGGIREISIKFSGQDPAQDLLDIRPVCHYMMGGLHTDID
GATEIQGVWAAGEAACNSVHGSNRLGANSTSECIVWGKITGELAIDYIQKNESTNPWPHH
LVAAEEKRIYDGIFRGNGDVNPYEIRQQLTDTMNEKAYVYKNETNLVEGLKKIRELKKQT
WKHVDDKAKEYNTNFANVMELDSMFRVAEIVLLGAINRKESRGAHARTDYPKRDDANFLH
HTLAYYDPNEPIMKTHPVTITKYQPVERKY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggtagattcgcttgaatttgatttaattatttgtggttctggtcttgcaggtctaaga
gctgctattgctgcagccaaaaaaggacctaatctcaaaattggaattgtttctaaagtt
caagtgatgcgttcccattctgtttctgcagaaggtggaaccgcagcagttctttttgaa
gatgaaggtgacacaattgaatctcatgtttatgacactgtcaaaggaagtgattttctt
gcagaccaagatgttgcagaaagactatgtgtcgaaatgccaaaagaaattcatcaatta
gatcattggggtatgccatggtctagaagagacgatggtagaattgatcaaagaaatttt
ggtggttacagtttccctagagcaacatatgcctcagataaagtcggtttctttgaaatg
caaactttgtatgatacatgccaaaaatttgaaaatattgaatatcttaacgaatggttt
gtaacatcaattattcatgatggaaagcgattcatgggagttactgcaattgaattaggc
tctggaaccttttacacaattaaaggcaaagctctaatcattgcaactggtggtgcagga
agattatacagtttttcaacttatgccctttcttcaacacctgatggattggatatggga
ttacgtgctggcatggcactcaaagatatggagtttgttcaatttcatccaacaggaatc
ttgccttctggaattttaatcacagaaggtgcaagaggagaagggggttatcttcttaac
aataagggtgagagatttatgaaaacatatgctgctggcaaaatggaattagctccacgt
gatattgtatcaagatcaattatgacagaaattcaagaaggacgtggattcaaacacgaa
actggtgttgattgtatgaaactagatttacgacatctgggagatgaaaaaattaaagaa
aaattaggtggaattagagaaatctcaataaaattttcaggccaagatcctgctcaagat
ttacttgacattagacctgtttgtcattacatgatgggaggacttcatacagatattgac
ggtgcaactgaaattcaaggtgtatgggctgcaggtgaagctgcctgtaacagcgttcat
ggctctaatcgtttaggtgcaaattccacttcagaatgtatcgtttggggtaaaattacc
ggtgaattggcaattgactatattcaaaagaatgaatctacaaatccttggccccatcat
ttggtcgctgctgaagagaagagaatctatgatggaatatttagaggaaatggtgatgtt
aatccctatgaaattagacaacaactaacagatacaatgaatgaaaaagcatatgtctac
aaaaatgaaacaaatcttgttgaaggtcttaaaaaaattcgtgaactaaaaaagcaaact
tggaaacacgttgacgataaagcaaaagaatacaataccaattttgcaaatgtaatggaa
ctcgattctatgtttagagtagcagagattgttttacttggagcaattaatagaaaagaa
tctcgtggtgcacatgcaagaactgattatccaaaacgtgatgatgccaactttttacat
cacactctggcttattacgatccaaatgaacccatcatgaaaacacatccagttacaatt
actaaatatcagccagtggagaggaaatactag
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