Candidatus Nitrosopumilus sediminis: NSED_01265
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Entry
NSED_01265 CDS
T02303
Name
(GenBank) carbamoyl-phosphate synthase L chain ATP-binding protein
KO
K18603
acetyl-CoA/propionyl-CoA carboxylase [EC:
6.4.1.2
6.4.1.3
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00720
Other carbon fixation pathways
nir01100
Metabolic pathways
nir01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
NSED_01265
Enzymes [BR:
nir01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
NSED_01265
6.4.1.3 propionyl-CoA carboxylase
NSED_01265
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_3
ATP-grasp_4
ATPgrasp_ST
GARS_A
ATP-grasp_5
LpxI_N
Motif
Other DBs
NCBI-ProteinID:
AFS82065
UniProt:
K0BAQ8
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Position
214020..215510
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AA seq
496 aa
AA seq
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MMIEKVLIANRGEIALRVIRTCKALGIKTVAVYSDEDYNSMHVKQATEAYHIGEAAPAKS
YLNQDKILEVMLKSGSDAVHPGYGFLSENDDFANLCEKNKIIFIGPTAESMNLCGDKMKC
KDAMLKAKVPTVPGSPGLVKDADDAEKIANEIGYPVMLKSVYGGGGRGIRIVNNDQELRD
GYESVTGESIAAVGKSAILVEKFLEKTRHIEYQFARDTHGNTVHIFERECSIQRRNQKLI
EQTPSPIVDEETRARVGESVCRAADAVDYTNLGTAEFLRADNGDFYFIEINARLQVEHPI
TEFVSGLDLVKLQLDIANGEPIPFKQSDLKMNGYAIECRINAEDTFLDFAPSTGPVPDVV
IPAGPSVRCDTYLYPGCTVSPFYDSLMAKLVTWGQTFEESRTRMLAALNDFYIQGVETSI
PLYKTILNSEEYKNGDLSTDFLKRHGMIDRLTEDLKKEKEEKSEAALAAAIIHSEYFKSR
AQTSTANNSNWKYKLD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgaaaaagtacttatcgcaaacagaggagaaatcgctttacgtgttattaga
acatgcaaagcactaggaattaagaccgtagctgtctattctgatgaagattacaattca
atgcatgttaaacaagcaactgaagcatatcatattggagaagctgctcctgcaaaatca
tatcttaatcaagataaaattcttgaagtgatgctcaaatcaggatcagatgcagttcat
ccaggttatggctttctttctgaaaatgatgactttgcaaatctatgtgaaaaaaataaa
attatctttattggtcctactgcagaatctatgaatctctgtggggataaaatgaaatgt
aaagatgcaatgcttaaagcaaaagttccaacagtacctggaagtccaggtttggtaaaa
gatgctgatgatgcagaaaaaattgcaaatgaaattggttatccggtaatgttaaaatca
gtttatggtggcggaggtcgtggaattagaatcgtaaataatgaccaagaattgcgtgat
gggtatgaatcagttactggtgaatccattgcagcagtgggtaaatctgcaattctggta
gaaaaattcttggaaaaaacacgtcacattgaatatcaatttgctagagatactcatggt
aatactgttcacatatttgaaagagaatgttctattcaaagacgtaaccaaaaattaatc
gaacaaacaccttcgccaattgtagatgaagaaacaagagcacgtgtaggcgaatctgtt
tgtagagccgctgatgcagtagattatacaaacttgggtacggctgaattcttgagggct
gataatggagacttttactttattgaaattaatgcaagattacaagtagagcatccaatt
acagaatttgtatctggattagatttggtcaaattacaactagatattgcaaatggcgaa
ccaattccattcaaacaaagtgacctcaaaatgaatggctatgctattgaatgcagaatt
aatgcagaagatactttcttagattttgctccttcaacaggacctgttccagatgttgta
attccagcaggaccaagtgttagatgcgatacctatctttatcctggatgtactgtttct
ccattttatgactctcttatggcaaaactcgttacttggggacaaacctttgaagaatct
agaacaagaatgcttgctgcactaaatgacttttacattcaaggagttgaaacttcaatt
ccattatacaaaacaattctaaattctgaagaatacaaaaatggagacctttcaaccgat
ttcctaaaacgtcatggaatgattgatagattaactgaagatcttaaaaaagaaaaagaa
gagaaaagcgaagctgcattagccgctgcaattattcattctgaatactttaagagtaga
gcccaaactagtactgctaataactctaattggaaatataaattggattga
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